SMTL ID : 7f1g.1

BACE2 xaperone complex with N-{3-[(4R,5R,6R)-2-amino-5-fluoro-4,6-dimethyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-2H,3H-[1,4]dioxino[2,3-c]pyridine-7-carboxamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 0QQ: N-[3-[(4R,5R,6R)-2-azanyl-5-fluoranyl-4,6-dimethyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-2,3-dihydro-[1,4]dioxino[2,3-c]pyridine-7-carboxamide(Non-covalent)

0QQ.1: 20 residues within 4Å: Chain A: D.13, G.15, R.16, G.17, Y.18, L.34, D.36, G.38, S.39, Y.75, F.112, W.119, I.122, D.229, S.230, G.231, T.232, T.233, A.335, E.339 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.75, A:W.119, A:I.122 Hydrogen bonds: A:D.36, A:W.119, A:G.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ueno, T. et al., Discovery of Extremely Selective Fused Pyridine-Derived beta-Site Amyloid Precursor Protein-Cleaving Enzyme (BACE1) Inhibitors with High In Vivo Efficacy through 10s Loop Interactions. J.Med.Chem. (2021)

Release Date

2022-02-23

Peptides

Beta-secretase 2: A
XAPERONE: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Beta-secretase 2

XAPERONE

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