SMTL ID : 7htq.1

PanDDA analysis group deposition -- Crystal Structure of FatA in complex with Z55993012

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

8 x 01: 4-amino-N,N-diethylbenzamide

01.1: 9 residues within 4Å: Chain A: A.71, E.96, I.99, G.100, T.101, K.122, W.123, V.124 Ligands: 01.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.71, A:I.99, A:K.122, A:K.122, A:V.124 Hydrogen bonds: A:E.96, A:W.123 01.2: 8 residues within 4Å: Chain A: A.71, R.72, L.164, K.165, K.166, D.223, Y.224 Ligands: 01.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.223 Hydrogen bonds: A:A.71, A:Y.224 Water bridges: A:R.72 01.3: 12 residues within 4Å: Chain A: H.44, A.45, V.48, F.50, A.56, W.68, C.93, T.101, R.103, W.123, Y.144, F.147 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.68, A:T.101, A:W.123, A:Y.144 Hydrogen bonds: A:R.103, A:F.147 pi-Stacking: A:F.50 01.4: 11 residues within 4Å: Chain A: P.183, R.185, L.188, Q.192, H.193, V.194, C.228, Q.229, Q.230, D.231 Chain B: M.178 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.183, A:R.185, A:L.188, A:L.188, A:V.194 Hydrogen bonds: A:Q.192, A:D.231, A:D.231 Water bridges: A:V.194, A:Q.230 01.7: 9 residues within 4Å: Chain B: A.71, E.96, I.99, G.100, T.101, K.122, W.123, V.124 Ligands: 01.8 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:A.71, B:I.99, B:K.122, B:K.122, B:V.124 Hydrogen bonds: B:W.123 01.8: 8 residues within 4Å: Chain B: A.71, R.72, L.164, K.165, K.166, D.223, Y.224 Ligands: 01.7 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:D.223 Hydrogen bonds: B:A.71, B:K.166, B:Y.224 Water bridges: B:R.72 01.9: 12 residues within 4Å: Chain B: H.44, A.45, V.48, F.50, A.56, W.68, C.93, T.101, R.103, W.123, Y.144, F.147 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:W.68, B:T.101, B:W.123, B:Y.144 Hydrogen bonds: B:R.103, B:F.147 pi-Stacking: B:F.50 01.10: 10 residues within 4Å: Chain A: M.178 Chain B: P.183, L.188, Q.192, H.193, V.194, C.228, Q.229, Q.230, D.231 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:P.183, B:V.194 Hydrogen bonds: B:Q.192, B:D.231 Water bridges: B:V.194, B:Q.230

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 4 residues within 4Å: Chain A: T.29, V.30, Y.80, W.283 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.30 Water bridges: A:L.217 SO4.6: 4 residues within 4Å: Chain A: V.48, G.49, F.50, F.147 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.48 SO4.11: 4 residues within 4Å: Chain B: T.29, V.30, Y.80, W.283 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:V.30 Water bridges: B:A.28, B:E.31, B:L.217 SO4.12: 4 residues within 4Å: Chain B: V.48, G.49, F.50, F.147 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kot, E. et al., PanDDA analysis group deposition. To Be Published

Release Date

2025-08-13

Peptides

Oleoyl-acyl carrier protein thioesterase 1, chloroplastic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oleoyl-acyl carrier protein thioesterase 1, chloroplastic

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