SMTL ID : 9hmt.1

Crystal structure of Arabidopsis thaliana Acyl-ACP Thioesterase (At-FatA) complexed with methiozolin-fluorine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.38 Å

Oligo State

homo-dimer

Ligands

2 x 01: (5~{S})-5-[[2,6-bis(fluoranyl)phenyl]methoxymethyl]-3-(2-fluorophenyl)-5-methyl-4~{H}-1,2-oxazole

01.1: 17 residues within 4Å: Chain A: Q.38, G.41, C.42, H.44, A.45, V.48, F.50, F.55, A.56, W.68, C.93, T.101, R.103, W.123, Y.144, F.147, C.148 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.48, A:F.50, A:F.55, A:W.68, A:W.68, A:T.101, A:W.123, A:W.123, A:F.147 Hydrogen bonds: A:R.103 pi-Stacking: A:H.44 01.4: 17 residues within 4Å: Chain B: Q.38, G.41, C.42, H.44, A.45, V.48, F.50, F.55, A.56, W.68, C.93, T.101, R.103, W.123, Y.144, F.147, C.148 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:V.48, B:F.50, B:F.55, B:W.68, B:W.68, B:T.101, B:W.123, B:W.123, B:F.147 Hydrogen bonds: B:R.103 pi-Stacking: B:H.44

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: T.29, V.30, E.31, Y.80, V.212, E.216, L.217, W.283 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.30, A:L.217 GOL.5: 8 residues within 4Å: Chain B: T.29, V.30, E.31, Y.80, V.212, E.216, L.217, W.283 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.30, B:L.217

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: S.95, G.97, R.141, L.145 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.95, A:S.95, A:G.97 Salt bridges: A:R.141 SO4.6: 4 residues within 4Å: Chain B: S.95, G.97, R.141, L.145 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.95, B:S.95, B:G.97 Salt bridges: B:R.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montgomery, M.G., Crystal structure of Arabidopsis thaliana Acyl-ACP Thioesterase (At-FatA) complexed with methiozolin-fluorine. To Be Published

Release Date

2025-05-14

Peptides

Oleoyl-acyl carrier protein thioesterase 1, chloroplastic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AaA

B
AaA

Oleoyl-acyl carrier protein thioesterase 1, chloroplastic

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