SMTL ID : 7lot.1

Human PPAR Gamma LBD in Complex with Tetrazole Compound N-{3-[(4-methylbenzyl)oxy]benzyl}-2H-tetrazol-5-amine.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-dimer

Ligands

2 x Y9A: ~{N}-[[3-[(4-methylphenyl)methoxy]phenyl]methyl]-1~{H}-1,2,3,4-tetrazol-5-amine(Non-covalent)

Y9A.1: 9 residues within 4Å: Chain A: C.86, R.89, S.90, L.131, I.142, S.143, F.164, M.165, H.250 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:R.89, A:L.131, A:I.142, A:I.142 Hydrogen bonds: A:S.90, A:S.90 pi-Stacking: A:H.250 Y9A.2: 12 residues within 4Å: Chain B: I.82, G.85, C.86, R.89, S.90, A.93, I.127, M.130, L.131, I.142, S.143, M.165 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:R.89, B:R.89, B:A.93, B:I.127, B:M.130, B:L.131, B:I.142 Hydrogen bonds: B:S.143 pi-Cation interactions: B:R.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Paula, K. et al., Tetrazoles as PPAR gamma ligands: A structural and computational investigation. J.Mol.Graph.Model. (2021)

Release Date

2021-02-24

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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