SMTL ID : 7lrl.1

Co-complex CYP46A1 with 7742 (Soticlestat/TAK-935))

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 24 residues within 4Å: Chain A: K.84, Y.89, L.105, V.106, W.114, R.118, F.279, A.282, G.283, T.286, S.287, A.347, T.350, P.409, F.410, S.411, R.415, S.416, C.417, I.418, G.419, F.422, A.423 Ligands: YBS.2 18 PLIP interactions: 18 interactions with chain A, Hydrophobic interactions: A:L.105, A:V.106, A:F.279, A:F.279, A:A.282, A:F.410, A:I.418, A:F.422 Hydrogen bonds: A:Y.89, A:T.350 Water bridges: A:K.84, A:K.84, A:R.352, A:S.411 Salt bridges: A:K.84, A:R.118, A:R.415 Metal complexes: A:C.417

1 x YBS: [4-oxidanyl-4-(phenylmethyl)piperidin-1-yl]-(2-pyridin-4-ylpyridin-3-yl)methanone(Non-covalent)

YBS.2: 15 residues within 4Å: Chain A: M.88, L.92, F.101, V.106, L.199, I.281, A.282, T.286, A.347, W.348, G.349, F.351, A.454, T.455 Ligands: HEM.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.92, A:L.199, A:A.282, A:T.286, A:W.348, A:F.351, A:A.454 Hydrogen bonds: A:W.348, A:G.349 pi-Stacking: A:F.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koike, T. et al., Discovery of Soticlestat, a Potent and Selective Inhibitor for Cholesterol 24-Hydroxylase (CH24H). J.Med.Chem. (2021)

Release Date

2021-08-25

Peptides

Cholesterol 24-hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cholesterol 24-hydroxylase

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