SMTL ID : 7nht.1

Akirin2 bound human proteasome

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 2.80 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-mer

Ligands

3 x K: POTASSIUM ION(Non-covalent)

K.1: 4 residues within 4Å: Chain G: T.14, Y.125, N.128, M.131 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:T.14, G:Y.125, G:N.128, G:M.131 K.2: 3 residues within 4Å: Chain L: A.211, D.214, T.217 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:A.211, L:T.217 K.3: 5 residues within 4Å: Chain N: R.53, M.198, D.201, G.202, S.204 3 PLIP interactions: 3 interactions with chain N Metal complexes: N:M.198, N:D.201, N:S.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Almeida, M. et al., AKIRIN2 controls the nuclear import of proteasomes in vertebrates. Nature (2021)

Release Date

2021-09-01

Peptides

Proteasome subunit alpha type-2: A
Proteasome subunit alpha type-4: B
Proteasome subunit alpha type-7: C
Proteasome subunit alpha type-5: D
Proteasome subunit alpha type-1: E
Proteasome subunit alpha type-3: F
Proteasome subunit alpha type-6: G
Proteasome subunit beta type-7: H
Proteasome subunit beta type-3: I
Proteasome subunit beta type-2: J
Proteasome subunit beta type-5: K
Proteasome subunit beta type-1: L
Proteasome subunit beta type-4: M
Proteasome subunit beta type-6: N
Akirin-2: OP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

O
c

P
d

Proteasome subunit alpha type-2

Proteasome subunit alpha type-4

Proteasome subunit alpha type-7

Proteasome subunit alpha type-5

Proteasome subunit alpha type-1

Proteasome subunit alpha type-3

Proteasome subunit alpha type-6

Proteasome subunit beta type-7

Proteasome subunit beta type-3

Proteasome subunit beta type-2

Proteasome subunit beta type-5

Proteasome subunit beta type-1

Proteasome subunit beta type-4

Proteasome subunit beta type-6

Akirin-2

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