- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 6 x 1NP: 1-NAPHTHOL(Non-covalent)
1NP.3: 7 residues within 4Å:- Chain A: V.73, T.78, L.80
- Chain C: T.53, R.54
- Ligands: PO4.2, 1NP.4
4 PLIP interactions:1 interactions with chain C, 3 interactions with chain A- Hydrophobic interactions: C:T.53, A:V.73, A:V.73
- Water bridges: A:L.80
1NP.4: 8 residues within 4Å:- Chain A: E.84, T.89, V.92, L.93, Y.96
- Chain C: R.54, L.267
- Ligands: 1NP.3
8 PLIP interactions:5 interactions with chain A, 3 interactions with chain C- Hydrophobic interactions: A:T.89, A:V.92, A:V.92, A:L.93, A:Y.96, C:R.54, C:R.54
- Hydrogen bonds: C:R.54
1NP.5: 7 residues within 4Å:- Chain A: R.54, L.267, A.291
- Chain B: E.84, V.92, Y.96
- Ligands: 1NP.8
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:V.92, B:V.92, B:Y.96, A:R.54, A:R.54, A:A.291
1NP.8: 11 residues within 4Å:- Chain A: T.53, R.54, F.57
- Chain B: I.47, V.73, T.78, Q.79, L.80, D.83, L.93
- Ligands: 1NP.5
6 PLIP interactions:2 interactions with chain A, 4 interactions with chain B- Hydrophobic interactions: A:T.53, A:F.57, B:I.47, B:T.78, B:L.93
- Water bridges: B:L.80
1NP.11: 8 residues within 4Å:- Chain B: R.54, L.267
- Chain C: E.84, T.89, V.92, L.93, Y.96
- Ligands: 1NP.12
8 PLIP interactions:5 interactions with chain C, 3 interactions with chain B- Hydrophobic interactions: C:T.89, C:V.92, C:V.92, C:L.93, C:Y.96, B:R.54, B:R.54
- Hydrogen bonds: B:R.54
1NP.12: 9 residues within 4Å:- Chain B: T.53, R.54, F.57
- Chain C: I.47, T.78, L.80, L.93
- Ligands: PO4.10, 1NP.11
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain C- Hydrophobic interactions: B:T.53, B:R.54, B:F.57, C:I.47, C:L.93
- Water bridges: C:L.80
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)
- Release Date
- 2021-06-30
- Peptides
- Ornithine carbamoyltransferase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x PO4: PHOSPHATE ION(Non-functional Binders)
- 6 x 1NP: 1-NAPHTHOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)
- Release Date
- 2021-06-30
- Peptides
- Ornithine carbamoyltransferase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C