- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- homo-trimer
- Ligands
- 5 x PO4: PHOSPHATE ION(Non-functional Binders)
- 6 x 1NP: 1-NAPHTHOL(Non-covalent)
1NP.3: 7 residues within 4Å:- Chain A: E.84, V.92, Y.96
- Chain C: R.54, L.267, R.294
- Ligands: 1NP.4
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain C- Hydrophobic interactions: A:V.92, A:V.92, A:Y.96, C:R.54, C:R.54
1NP.4: 7 residues within 4Å:- Chain A: V.73, T.78, L.80
- Chain C: T.53, R.54
- Ligands: PO4.2, 1NP.3
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain C- Hydrophobic interactions: A:V.73, A:V.73, A:L.80, C:T.53
- Water bridges: A:L.80
1NP.8: 6 residues within 4Å:- Chain A: R.54
- Chain B: E.84, V.92, L.93, Y.96
- Ligands: 1NP.9
6 PLIP interactions:2 interactions with chain A, 4 interactions with chain B- Hydrophobic interactions: A:R.54, A:R.54, B:V.92, B:V.92, B:L.93, B:Y.96
1NP.9: 7 residues within 4Å:- Chain A: T.53, F.57
- Chain B: I.47, V.73, T.78, L.80
- Ligands: 1NP.8
6 PLIP interactions:4 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:I.47, B:V.73, B:L.80, B:L.80, A:T.53, A:F.57
1NP.10: 7 residues within 4Å:- Chain B: R.54, L.267
- Chain C: E.84, T.89, V.92, Y.96
- Ligands: 1NP.11
6 PLIP interactions:4 interactions with chain C, 2 interactions with chain B- Hydrophobic interactions: C:T.89, C:V.92, C:V.92, C:Y.96, B:R.54, B:R.54
1NP.11: 10 residues within 4Å:- Chain B: T.53, R.54, F.57
- Chain C: I.47, V.73, S.77, T.78, L.80
- Ligands: PO4.7, 1NP.10
8 PLIP interactions:3 interactions with chain B, 5 interactions with chain C- Hydrophobic interactions: B:T.53, B:R.54, B:F.57, C:I.47, C:I.47, C:V.73, C:L.80, C:L.80
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)
- Release Date
- 2021-06-30
- Peptides
- Ornithine carbamoyltransferase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- homo-trimer
- Ligands
- 5 x PO4: PHOSPHATE ION(Non-functional Binders)
- 6 x 1NP: 1-NAPHTHOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)
- Release Date
- 2021-06-30
- Peptides
- Ornithine carbamoyltransferase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
EC
F