SMTL ID : 7p4u.1

Crystal structure of PqsR (MvfR) ligand-binding domain in complex with 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.74 Å

Oligo State

homo-dimer

Ligands

2 x 5N9: ~{N}-[[2-(3-chloranyl-4-propan-2-yloxy-phenyl)pyrimidin-5-yl]methyl]-2-(trifluoromethyl)pyridin-4-amine(Non-covalent)

5N9.1: 22 residues within 4Å: Chain A: A.12, P.39, I.59, A.78, V.80, H.94, S.95, I.96, L.99, L.117, L.118, V.121, F.131, W.144, I.146, A.147, P.148, L.164, S.165, Y.168, I.173, T.175 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.59, A:L.99, A:I.146, A:Y.168, A:I.173 pi-Stacking: A:Y.168 5N9.2: 22 residues within 4Å: Chain B: A.12, P.39, I.59, A.78, V.80, H.94, S.95, I.96, L.99, L.117, L.118, V.121, F.131, W.144, I.146, A.147, P.148, L.164, S.165, Y.168, I.173, T.175 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:I.59, B:L.99, B:I.146, B:Y.168, B:I.173 pi-Stacking: B:Y.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hamed, M.M. et al., Towards Translation of PqsR Inverse Agonists: From In Vitro Efficacy Optimization to In Vivo Proof-of-Principle. Adv Sci (2023)

Release Date

2022-07-27

Peptides

Transcriptional regulator MvfR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Transcriptional regulator MvfR

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