SMTL ID : 7pd7.2 (3 other biounits)

Crocagin methyl transferase CgnL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: S.40, L.41, R.135, P.136, G.137, G.138, R.139, H.251 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.135, A:R.135, A:R.139, A:R.139, A:H.251 GOL.3: 3 residues within 4Å: Chain A: D.99, R.129, R.132 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.129, A:R.132, A:R.132

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.2: 24 residues within 4Å: Chain A: G.5, G.6, L.10, F.11, Y.18, G.51, G.53, I.71, D.72, A.73, S.74, M.77, R.93, R.94, M.95, E.96, C.111, W.112, T.113, Y.116, F.175, A.187, H.204, L.206 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.11 Hydrogen bonds: A:G.5, A:Y.18, A:G.53, A:D.72, A:D.72, A:A.73, A:S.74, A:M.95, A:E.96, A:C.111, A:T.113, A:Y.116 Water bridges: A:R.94 Salt bridges: A:H.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adam, S. et al., Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis. Nat.Chem. (2023)

Release Date

2022-08-17

Peptides

Methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Methyltransferase

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