SMTL ID : 7pd7.3 (3 other biounits)

Crocagin methyl transferase CgnL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: H.146, A.148, H.149, D.210, H.212 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.146, A:H.149, A:H.212 GOL.2: 7 residues within 4Å: Chain A: S.40, L.41, R.135, G.137, G.138, R.139, H.251 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.135, A:R.135, A:H.251

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.3: 26 residues within 4Å: Chain A: G.5, G.6, F.11, Y.18, D.19, F.27, V.50, G.51, C.52, G.53, T.54, G.55, A.56, I.71, D.72, A.73, S.74, M.77, R.93, R.94, M.95, E.96, L.110, C.111, T.113, Y.116 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.18 Hydrogen bonds: A:G.53, A:T.54, A:D.72, A:D.72, A:A.73, A:S.74, A:M.95, A:E.96 Water bridges: A:H.31, A:H.31, A:C.52, A:A.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adam, S. et al., Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis. Nat.Chem. (2023)

Release Date

2022-08-17

Peptides

Methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Methyltransferase

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