SMTL ID : 7qnz.1

human Lig1-DNA-PCNA complex reconstituted in absence of ATP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-3-mer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 13 residues within 4Å: Chain A: Y.567, K.568, Y.569, R.573, R.589, E.621, F.660, M.723, K.725, W.742, K.744 Chain F: G.1, T.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:Y.567, A:Y.569, A:R.573, A:R.589, A:R.589, A:K.725 Salt bridges: A:K.568, A:R.589, A:K.744 pi-Stacking: A:F.660

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blair, K. et al., Mechanism of human Lig1 regulation by PCNA in Okazaki fragment sealing. Nat Commun (2022)

Release Date

2023-01-11

Peptides

DNA ligase 1: A
Proliferating cell nuclear antigen: BCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

DNA ligase 1

Proliferating cell nuclear antigen

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