SMTL ID : 7qoj.1

Tail barrel assembly of the phicrAss001 virion with C12 symmetry imposed

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-2-2-1-3-2-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: A.114, E.119, Q.160 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:A.114, A:E.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bayfield, O.W. et al., Structural atlas of a human gut crassvirus. Nature (2023)

Release Date

2023-03-29

Peptides

Portal protein gp20: A
Ring protein 1 gp43: B
Ring protein 2 gp40: C
Ring protein 3 gp35: D
Ring protein 4/5 gp34: EF
Tail hub protein A gp38: GH
Tail hub protein B gp39: I
Tail fiber protein gp22: JKL
Cargo protein 1 gp45: MN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

Portal protein gp20

Ring protein 1 gp43

Ring protein 2 gp40

Ring protein 3 gp35

Ring protein 4/5 gp34

Tail hub protein A gp38

Tail hub protein B gp39

Tail fiber protein gp22

Cargo protein 1 gp45

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