SMTL ID : 7qok.1

Tail muzzle assembly of the phicrAss001 virion with C6 symmetry imposed

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-6-12-mer

Ligands

6 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: H.723, D.882 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.882 MG.2: 2 residues within 4Å: Chain E: H.723, D.882 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:D.882 MG.3: 2 residues within 4Å: Chain I: H.723, D.882 1 PLIP interactions: 1 interactions with chain I Metal complexes: I:D.882 MG.4: 2 residues within 4Å: Chain M: H.723, D.882 1 PLIP interactions: 1 interactions with chain M Metal complexes: M:D.882 MG.5: 2 residues within 4Å: Chain Q: H.723, D.882 1 PLIP interactions: 1 interactions with chain Q Metal complexes: Q:D.882 MG.6: 2 residues within 4Å: Chain U: H.723, D.882 1 PLIP interactions: 1 interactions with chain U Metal complexes: U:D.882

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bayfield, O.W. et al., Structural atlas of a human gut crassvirus. Nature (2023)

Release Date

2023-03-29

Peptides

Muzzle protein gp44: AEIMQU
Muzzle bound helix: BFJNRV
Ring protein 4/5 gp34: CDGHKLOPSTWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
A

I
A

M
A

Q
A

U
A

B
B

F
B

J
B

N
B

R
B

V
B

C
C

D
D

G
C

H
D

K
C

L
D

O
C

P
D

S
C

T
D

W
C

X
D

Muzzle protein gp44

Muzzle bound helix

Ring protein 4/5 gp34

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