SMTL ID : 7r9t.1

Crystal structure of HPK1 in complex with compound 17

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x 2TR: 6-amino-3-[(1S,3R)-4'-chloro-3-hydroxy-1',2'-dihydrospiro[cyclopentane-1,3'-pyrrolo[2,3-b]pyridin]-5'-yl]-2-fluoro-N,N-dimethylbenzamide(Non-covalent)

2TR.1: 16 residues within 4Å: Chain A: L.24, G.25, Y.29, V.32, A.45, K.47, M.92, E.93, F.94, C.95, G.96, G.98, S.99, D.102, L.145, A.155 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.29, A:Y.29, A:V.32, A:L.145, A:A.155 Hydrogen bonds: A:G.25, A:C.95, A:D.102 Water bridges: A:K.47, A:D.102, A:D.156, A:D.156 2TR.2: 16 residues within 4Å: Chain B: L.24, G.25, Y.29, A.45, K.47, V.76, M.92, E.93, F.94, C.95, G.96, G.98, S.99, D.102, L.145, A.155 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.24, B:L.24, B:Y.29, B:A.155 Hydrogen bonds: B:G.25, B:E.93, B:C.95, B:D.102 Water bridges: B:G.26, B:K.47, B:K.47, B:D.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chan, B.K. et al., Discovery of Spiro-azaindoline Inhibitors of Hematopoietic Progenitor Kinase 1 (HPK1). Acs Med.Chem.Lett. (2022)

Release Date

2022-01-05

Peptides

Hematopoietic progenitor kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hematopoietic progenitor kinase

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