SMTL ID : 7rkm.1

Structure of CX3CL1-US28-Gi-scFv16 in C-state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 7 residues within 4Å: Chain F: V.78, I.81, N.82, L.89, C.153, I.157, W.160 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:I.81, F:I.157, F:W.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsutsumi, N. et al., Atypical structural snapshots of human cytomegalovirus GPCR interactions with host G proteins. Sci Adv (2022)

Release Date

2022-01-26

Peptides

Guanine nucleotide-binding protein G(i) subunit alpha-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: C
Antibody fragment scFv16: D
Fractalkine: E
G-protein coupled receptor homolog US28: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
L

F
R

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(i) subunit alpha-1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Antibody fragment scFv16

Fractalkine

G-protein coupled receptor homolog US28

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