SMTL ID : 7soo.1

LaM domain of human LARP1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.28, V.29, R.88 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.29 Water bridges: A:D.30 Salt bridges: A:R.88 SO4.2: 5 residues within 4Å: Chain A: Y.26, D.35, F.37, F.56 Ligands: SO4.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.35 Water bridges: A:N.31, A:H.57 SO4.3: 5 residues within 4Å: Chain A: Y.26, F.56, H.57, R.58 Ligands: SO4.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.26, A:H.57, A:R.58 Water bridges: A:H.57 SO4.4: 3 residues within 4Å: Chain A: F.37, R.40, K.41 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.40, A:K.41

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 3 residues within 4Å: Chain A: T.51, L.52, S.55 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.51, A:S.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kozlov, G. et al., Structural basis of 3'-end poly(A) RNA recognition by LARP1. Nucleic Acids Res. (2022)

Release Date

2022-08-03

Peptides

Isoform 2 of La-related protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoform 2 of La-related protein 1

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