SMTL ID : 8g90.1

LaM domain of human LARP1 in complex with Sp phosphorothioate isomer of AAAAA(SRA) RNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x A- A- A- SRA: RNA (5'-R(*AP*AP*AP*AP*AP*(SRA))-3')(Non-covalent)

A-A-A-SRA.1: 10 residues within 4Å: Chain A: Q.22, Y.25, Y.26, R.34, D.35, F.37, S.55, F.56, H.57, R.58 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.35 Water bridges: A:N.31, A:D.35, A:F.36, A:H.57 pi-Stacking: A:F.37, A:F.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kozlov, G. et al., Enhanced binding of guanylated poly(A) RNA by the LaM domain of LARP1. Rna Biol. (2024)

Release Date

2024-04-17

Peptides

Isoform 2 of La-related protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoform 2 of La-related protein 1

Related Entries With Identical Sequence