SMTL ID : 7sv1.1

Carbonic Anhydrase IX-mimic Complexed with 3-((2-((Naphthalen-2-ylmethyl)(4-sulfamoylphenethyl)amino)-2-oxoethyl)(phenethyl)amino)propanoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 8 residues within 4Å: Chain A: Y.4, G.9, P.10, Q.100, D.239, W.241, R.242, P.243 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.239, A:W.241

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain A: H.91, H.93, E.103, H.116, T.195 Ligands: U6V.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.91, A:H.93, A:H.116

1 x U6V: N~2~-(3-aminopropyl)-N-[(4-fluorophenyl)methyl]-N~2~-(2-phenylethyl)-N-[2-(4-sulfamoylphenyl)ethyl]glycinamide(Non-covalent)

U6V.3: 22 residues within 4Å: Chain A: W.2, F.17, H.61, L.88, Q.89, H.91, H.93, E.103, H.116, V.118, V.127, G.128, V.131, L.137, V.139, L.194, T.195, T.196, P.197, P.198, W.205 Ligands: ZN.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.17, A:V.118, A:L.194, A:L.194, A:P.198 Hydrogen bonds: A:W.2, A:T.195, A:T.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonardi, A. et al., The three-tails approach as a new strategy to improve selectivity of action of sulphonamide inhibitors against tumour-associated carbonic anhydrase IX and XII. J Enzyme Inhib Med Chem (2022)

Release Date

2022-04-06

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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