SMTL ID : 7t36.1

Crystal structure of the tandem bromodomain (BD1 and BD2) of human TAF1 bound to ZS1-322

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x EIO: (3R)-4-[6-{1-[diamino(hydroxy)-lambda~4~-sulfanyl]cyclopropyl}-2-(methylsulfanyl)pyrimidin-4-yl]-3-methylmorpholine(Non-covalent)

EIO.1: 12 residues within 4Å: Chain A: W.156, P.157, F.158, H.160, P.161, V.162, N.163, F.166, V.167, Y.212, N.213, Y.219 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:H.160, A:V.162, A:Y.212 Hydrogen bonds: A:N.163, A:N.213 Water bridges: A:N.163, A:Y.170 pi-Stacking: A:W.156

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: P.34, F.35, V.39, N.90, L.96 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.90 Water bridges: A:Y.47 EDO.3: 4 residues within 4Å: Chain A: K.191, S.197, D.200, D.201 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.191, A:K.191, A:D.200, A:D.200 EDO.4: 5 residues within 4Å: Chain A: R.27, H.36, L.57, Q.58, R.61 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.27, A:R.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karim, M.R. et al., Crystal structure of the tandem bromodomain (BD1 and BD2) of human TAF1 bound to ZS1-322. To Be Published

Release Date

2022-01-19

Peptides

Transcription initiation factor TFIID subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor TFIID subunit 1

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