SMTL ID : 7uy0.1 (1 other biounit)

Crystal structure of human Fgr tyrosine kinase in complex with A-419259

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: F.203, K.220, D.311, N.316, D.329 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.220, A:N.316 GOL.2: 8 residues within 4Å: Chain A: L.242, R.243, H.244, D.245, L.247, V.248, Q.249, K.326 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.242, A:H.244, A:V.248, A:K.326

1 x VSE: 7-[trans-4-(4-methylpiperazin-1-yl)cyclohexyl]-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine(Non-covalent)

VSE.3: 21 residues within 4Å: Chain A: L.198, G.199, V.206, A.218, K.220, M.239, V.248, L.250, I.261, T.263, E.264, F.265, M.266, G.269, S.270, D.273, L.318, A.328, D.329, F.330, L.332 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.206, A:V.206, A:K.220, A:V.248, A:L.250, A:I.261, A:L.318, A:A.328, A:L.332 Hydrogen bonds: A:E.264, A:M.266 Salt bridges: A:D.273, A:D.273 pi-Stacking: A:F.330

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: R.20, Q.176, T.177, Y.251 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, S. et al., ATP-site inhibitors induce unique conformations of the acute myeloid leukemia-associated Src-family kinase, Fgr. Structure (2022)

Release Date

2022-12-28

Peptides

Tyrosine-protein kinase Fgr: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase Fgr

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