SMTL ID : 7ymi.1

PSII-Pcb Dimer of Acaryochloris Marina

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
Ligands
212 x CL7: CHLOROPHYLL D(Non-covalent)
4 x PHO: PHEOPHYTIN A(Non-covalent)
22 x 8CT: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene(Non-covalent)
14 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)
12 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
8 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
4 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
2 x FE2: FE (II) ION(Non-covalent)
2 x BCT: BICARBONATE ION(Non-functional Binders)
2 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
28 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Shen, L. et al., Structure of a unique PSII-Pcb tetrameric megacomplex in a chlorophyll d -containing cyanobacterium. Sci Adv (2024)
Release Date
2023-08-16
Peptides
Photosystem II protein D1 2: AU
Photosystem II CP47 reaction center protein: BV
Photosystem II CP43 reaction center protein: CW
Photosystem II D2 protein 1: DX
Cytochrome b559 subunit alpha: EY
Photosystem II protein Y: FZ
Photosystem II 10 kDa phosphoprotein PsbH: G0
Photosystem II protein PsbI: H1
Photosystem II reaction center protein K: I2
Photosystem II reaction center protein L: J3
Photosystem II reaction center protein M: K4
Photosystem II reaction center protein T: L5
Photosystem II reaction center X protein: M6
Photosystem II reaction center protein Ycf12: N7
Photosystem II reaction center protein Z: O8
High light inducible protein: P9
Unknown protein: Qa
High light inducible protein: Rb
High light inducible protein: Sc
High light inducible protein: Td
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
U
a
B
B
V
b
C
C
W
c
D
D
X
d
E
E
Y
e
F
F
Z
f
G
H
0
h
H
I
1
i
I
K
2
k
J
L
3
l
K
M
4
m
L
T
5
t
M
X
6
x
N
Y
7
y
O
Z
8
z
P
2
9
6
Q
G
a
g
R
1
b
5
S
3
c
7
T
4
d
8
Membrane
We predict this structure to be a membrane protein.

Photosystem II protein D1 2

Toggle Identical (AU)

Photosystem II CP47 reaction center protein

Toggle Identical (BV)

Photosystem II CP43 reaction center protein

Toggle Identical (CW)

Photosystem II D2 protein 1

Toggle Identical (DX)

Cytochrome b559 subunit alpha

Toggle Identical (EY)

Photosystem II protein Y

Toggle Identical (FZ)

Photosystem II 10 kDa phosphoprotein PsbH

Toggle Identical (G0)

Photosystem II protein PsbI

Toggle Identical (H1)

Photosystem II reaction center protein K

Toggle Identical (I2)

Photosystem II reaction center protein L

Toggle Identical (J3)

Photosystem II reaction center protein M

Toggle Identical (K4)

Photosystem II reaction center protein T

Toggle Identical (L5)

Photosystem II reaction center X protein

Toggle Identical (M6)

Photosystem II reaction center protein Ycf12

Toggle Identical (N7)

Photosystem II reaction center protein Z

Toggle Identical (O8)

High light inducible protein

Toggle Identical (P9)

Unknown protein

Toggle Identical (Qa)

High light inducible protein

Toggle Identical (Rb)

High light inducible protein

Toggle Identical (Sc)

High light inducible protein

Toggle Identical (Td)

Related Entries With Identical Sequence

4v7r.25 | 4v7r.84 | 4xgc.1 | 4xwo.1 | 4xwo.2 | 4xwo.3 | 4xwo.4 | 6iaw.1 | 7ar9.1 | 7ard.1 | 7ymm.1 | 7ymm.2 | 7ymm.3 | 7ymm.4 | 7ymm.5 | 7ymm.6 | 7ymm.7 | 7ymm.8 | 7ymm.9 | 7ymm.10 | 7ymm.11 | 7ymm.12 | 7ymm.13 | 7ymm.14 | 7ymm.15 | 7ymm.16 | 7ymm.17 | 7ymm.18 | 7ymm.19 | 7ymm.20  more...