- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 7 x PC7: (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE(Non-covalent)
PC7.1: 13 residues within 4Å:- Chain 1: X.11, X.14
- Chain A: A.135, V.138, G.139, F.141, F.142, W.145, R.146
- Chain H: P.279
- Chain N: I.19, I.23
- Chain n: N.6
9 PLIP interactions:7 interactions with chain A, 1 interactions with chain N, 1 interactions with chain n- Hydrophobic interactions: A:F.141, A:F.142, A:F.142, A:W.145, A:W.145, A:W.145, N:I.19
- Salt bridges: A:R.146
- Hydrogen bonds: n:N.6
PC7.13: 25 residues within 4Å:- Chain 7: L.45, Y.46
- Chain L: S.160, K.163, S.164, N.166, K.167, I.170, F.223, F.224, D.230, E.233, Y.509, C.513, S.514, F.517, Y.518
- Chain M: F.264, F.389, F.391, V.395, T.399
- Chain b: I.59, Y.60, D.61
21 PLIP interactions:4 interactions with chain M, 12 interactions with chain L, 3 interactions with chain b, 2 interactions with chain 7- Hydrophobic interactions: M:F.264, M:F.389, M:F.391, M:V.395, L:K.167, L:I.170, L:F.224, L:F.224, L:Y.509, L:Y.509, L:F.517, L:Y.518, b:Y.60, 7:L.45, 7:Y.46
- Salt bridges: L:K.163, L:K.167, L:D.230, L:E.233, b:D.61
- Hydrogen bonds: b:D.61
PC7.17: 26 residues within 4Å:- Chain 2: Y.41
- Chain L: F.10, I.14, G.17, F.18, L.113, S.116, Y.117, A.120, F.124, I.127, G.143, V.146, L.150, Y.154
- Chain M: S.339, Q.340, W.346, S.347, V.350, F.351, F.359, P.360, L.361, K.405
- Ligands: PC7.18
17 PLIP interactions:11 interactions with chain L, 6 interactions with chain M- Hydrophobic interactions: L:F.10, L:F.10, L:F.18, L:F.18, L:F.18, L:Y.117, L:Y.117, L:F.124, L:I.127, M:V.350, M:F.351, M:F.359, M:L.361
- Hydrogen bonds: L:Y.117, M:S.339
- pi-Cation interactions: L:Y.154
- Salt bridges: M:K.405
PC7.18: 19 residues within 4Å:- Chain 2: F.72
- Chain 6: Y.82, Y.83
- Chain L: V.6, Y.7, F.10, I.14, F.18, L.61, F.62, E.63, N.64, F.65, I.127, M.136
- Chain M: I.435, G.436, Y.437
- Ligands: PC7.17
11 PLIP interactions:8 interactions with chain L, 2 interactions with chain M, 1 interactions with chain 6- Hydrophobic interactions: L:V.6, L:F.10, L:I.14, L:F.18, L:F.18, L:L.61, L:L.61, L:I.127
- Hydrogen bonds: M:Y.437, 6:Y.83
- pi-Cation interactions: M:Y.437
PC7.20: 18 residues within 4Å:- Chain 3: L.50
- Chain 5: M.60, L.64
- Chain N: Y.33, K.36, G.37, I.40, V.44, W.56, L.64, K.352, D.353, S.354, S.355, F.356, W.359
- Ligands: CDL.19, CDL.27
13 PLIP interactions:1 interactions with chain 3, 11 interactions with chain N, 1 interactions with chain 5- Hydrophobic interactions: 3:L.50, N:Y.33, N:K.36, N:I.40, N:V.44, N:W.56, N:L.64, N:W.359, N:W.359, N:W.359, 5:L.64
- Hydrogen bonds: N:Y.33
- Salt bridges: N:K.36
PC7.21: 18 residues within 4Å:- Chain 5: Y.18
- Chain A: E.124, Y.125, W.128, V.129, T.132, A.135
- Chain J: S.126, D.127, L.130, L.131
- Chain N: M.1, N.4, Y.7, L.8, L.11, I.12, F.84
16 PLIP interactions:2 interactions with chain J, 7 interactions with chain N, 6 interactions with chain A, 1 interactions with chain 5- Hydrophobic interactions: J:L.130, J:L.131, N:M.1, N:L.8, N:L.8, N:L.11, N:I.12, N:F.84, N:F.84, A:Y.125, A:Y.125, A:W.128, A:W.128, A:W.128, A:A.135, 5:Y.18
PC7.32: 16 residues within 4Å:- Chain 5: V.59, Y.62, Y.63, A.66
- Ligands: CDL.27
- Chain n: H.17, I.24, E.25, V.27, L.28, L.31
- Chain o: L.26, K.29, L.30, Q.31, G.32
12 PLIP interactions:7 interactions with chain n, 3 interactions with chain 5, 2 interactions with chain o- Hydrophobic interactions: n:I.24, n:V.27, n:L.28, n:L.31, 5:Y.62, 5:Y.62, 5:Y.63, o:L.26, o:L.26
- Hydrogen bonds: n:S.10
- Salt bridges: n:H.17, n:E.25
- 6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.2: 12 residues within 4Å:- Chain B: A.38, C.39, C.40, G.75, T.76, S.103, C.104, G.133, C.134, P.135
- Chain D: R.70, H.155
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.39, B:C.40, B:C.104, B:C.134
SF4.5: 14 residues within 4Å:- Chain F: I.213, P.231, S.386, C.387, G.388, Q.389, C.390, C.393, R.394, T.431, I.432, C.433, L.435, G.436
4 PLIP interactions:4 interactions with chain F,- Metal complexes: F:C.387, F:C.390, F:C.393, F:C.433
SF4.7: 9 residues within 4Å:- Chain G: H.136, D.139, C.140, C.143, Q.145, G.146, C.149, Q.152, V.240
4 PLIP interactions:4 interactions with chain G,- Metal complexes: G:H.136, G:C.140, G:C.143, G:C.149
SF4.8: 10 residues within 4Å:- Chain G: C.188, I.189, C.191, C.194, V.218, C.238, P.239, V.240, A.242, L.243
4 PLIP interactions:4 interactions with chain G,- Metal complexes: G:C.188, G:C.191, G:C.194, G:C.238
SF4.10: 12 residues within 4Å:- Chain I: H.118, C.140, P.141, I.145, C.169, I.170, Y.171, C.172, G.173, F.174, C.175, E.186
5 PLIP interactions:5 interactions with chain I,- Salt bridges: I:E.186
- Metal complexes: I:C.140, I:C.169, I:C.172, I:C.175
SF4.11: 12 residues within 4Å:- Chain I: C.130, I.131, S.132, C.133, K.134, C.136, I.147, Y.162, C.179, V.181, A.183, I.184
4 PLIP interactions:4 interactions with chain I,- Metal complexes: I:C.130, I:C.133, I:C.136, I:C.179
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.3: 10 residues within 4Å:- Chain E: C.143, T.145, P.147, C.148, C.184, M.185, G.186, A.187, C.188
- Chain F: P.130
4 PLIP interactions:4 interactions with chain E,- Metal complexes: E:C.143, E:C.148, E:C.184, E:C.188
FES.6: 9 residues within 4Å:- Chain G: R.74, C.76, Y.77, G.85, N.86, C.87, R.88, C.90, C.104
4 PLIP interactions:4 interactions with chain G,- Metal complexes: G:C.76, G:C.87, G:C.90, G:C.104
- 1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
FMN.4: 20 residues within 4Å:- Chain F: G.95, R.96, G.97, A.99, K.106, N.124, D.126, E.127, S.128, Y.212, I.213, G.215, E.216, E.217, V.250, T.251, N.252, T.255, A.434, L.435
14 PLIP interactions:14 interactions with chain F- Hydrophobic interactions: F:Y.212, F:Y.212, F:I.213, F:E.216, F:E.216, F:A.434, F:L.435
- Hydrogen bonds: F:R.96, F:N.124, F:D.126, F:D.126, F:G.215, F:N.252
- Salt bridges: F:K.106
- 7 x PTY: PHOSPHATIDYLETHANOLAMINE(Non-covalent)
PTY.9: 20 residues within 4Å:- Chain D: R.198
- Chain H: P.176, L.179, Y.182, I.183, L.186, P.193, F.194, V.257, L.261, Y.264, I.272, S.276, L.277, V.280, L.284
- Chain I: V.75, V.77, L.78, L.80
18 PLIP interactions:14 interactions with chain H, 2 interactions with chain I, 2 interactions with chain D- Hydrophobic interactions: H:L.179, H:Y.182, H:Y.182, H:I.183, H:P.193, H:F.194, H:V.257, H:L.261, H:I.272, H:L.277, H:V.280, H:L.284, I:V.75, I:L.78
- Hydrogen bonds: H:Y.264, D:R.198
- Water bridges: H:S.276
- Salt bridges: D:R.198
PTY.14: 15 residues within 4Å:- Chain 7: E.37
- Chain L: L.222, F.223, G.503, G.504, F.505, F.508, K.512
- Chain b: L.73, E.74, M.76, A.77, W.80, L.81, L.84
16 PLIP interactions:9 interactions with chain L, 6 interactions with chain b, 1 interactions with chain 7- Hydrophobic interactions: L:L.222, L:F.223, L:F.505, L:F.505, L:F.508, L:F.508, L:F.508, b:M.76, b:W.80, b:W.80, b:L.81, b:L.84
- Water bridges: L:R.511, b:L.73
- Salt bridges: L:K.512
- Hydrogen bonds: 7:E.37
PTY.15: 22 residues within 4Å:- Chain 6: F.74, F.75, L.76, A.78, F.79, Y.82, V.90, I.91, P.92
- Chain L: Y.67
- Chain M: W.42, Y.69, L.72, Y.73, L.76, F.80, Q.300, A.429, V.432, Y.437, M.438
- Chain Y: Y.5
25 PLIP interactions:11 interactions with chain 6, 13 interactions with chain M, 1 interactions with chain L- Hydrophobic interactions: 6:F.74, 6:F.74, 6:F.75, 6:F.75, 6:F.75, 6:L.76, 6:F.79, 6:F.79, 6:Y.82, 6:Y.82, M:W.42, M:W.42, M:W.42, M:L.72, M:Y.73, M:L.76, M:L.76, M:F.80, M:A.429, M:V.432
- Water bridges: 6:S.93, M:Q.300
- Hydrogen bonds: M:Y.73, M:Q.300, L:Y.67
PTY.22: 22 residues within 4Å:- Chain L: L.535
- Chain M: S.141, Y.144, N.145, I.148, Y.149, I.152, F.201
- Chain N: W.222, Y.229, F.320, S.321, L.324, T.327, I.328, I.331, R.335
- Chain O: Y.97, Y.98, D.125
- Ligands: CDL.12, CDL.31
17 PLIP interactions:9 interactions with chain N, 7 interactions with chain M, 1 interactions with chain O- Hydrophobic interactions: N:W.222, N:W.222, N:F.320, N:F.320, N:T.327, N:I.328, N:I.331, M:I.148, M:Y.149, M:Y.149, M:I.152, M:F.201, M:F.201
- Hydrogen bonds: N:Y.229, O:Y.98
- Salt bridges: N:R.335
- Water bridges: M:N.145
PTY.26: 14 residues within 4Å:- Chain M: F.186, F.201
- Chain Y: K.123, S.125, Y.126, T.127, M.130, L.154, A.158, V.161, I.162
- Ligands: CDL.12, PTY.28
- Chain c: F.122
8 PLIP interactions:7 interactions with chain Y, 1 interactions with chain M- Hydrophobic interactions: Y:Y.126, Y:L.154, Y:I.162, M:F.201
- Hydrogen bonds: Y:S.125, Y:Y.126, Y:T.127, Y:T.127
PTY.28: 22 residues within 4Å:- Chain M: I.159, S.160, S.182, F.183, V.184, A.185, F.186, G.187, F.189, W.193, S.243, A.247, L.250, I.251
- Chain Y: Y.126, L.165, F.166, Y.170
- Ligands: PTY.26
- Chain c: Y.121, F.122, D.124
22 PLIP interactions:13 interactions with chain M, 5 interactions with chain Y, 4 interactions with chain c- Hydrophobic interactions: M:I.159, M:F.183, M:F.183, M:V.184, M:A.185, M:F.186, M:F.186, M:F.189, M:W.193, M:L.250, M:L.250, M:I.251, Y:L.165, Y:L.165, Y:F.166, Y:Y.170, c:Y.121, c:Y.121, c:F.122
- Hydrogen bonds: M:S.182, Y:Y.126, c:F.122
PTY.29: 17 residues within 4Å:- Chain 7: Y.43, Y.46, I.53, F.54, L.57, N.61
- Chain M: L.256, A.385
- Chain c: G.93, L.94, V.96, A.97, M.98, A.100, T.101, F.104, R.107
9 PLIP interactions:4 interactions with chain 7, 2 interactions with chain M, 3 interactions with chain c- Hydrophobic interactions: 7:Y.46, 7:I.53, 7:F.54, M:L.256, M:A.385, c:L.94, c:T.101
- Hydrogen bonds: 7:N.61
- Salt bridges: c:R.107
- 5 x CDL: CARDIOLIPIN(Non-covalent)
CDL.12: 26 residues within 4Å:- Chain L: L.528, F.532, L.533, K.534, L.535, Y.536
- Chain M: Y.149, P.200, F.201
- Chain Y: P.147, V.151, L.154, V.155, A.158
- Ligands: PTY.22, PTY.26, CDL.31
- Chain c: W.79, L.87, Y.95
- Chain i: I.9, H.10, W.11, R.12
- Chain j: L.114, S.117
17 PLIP interactions:4 interactions with chain L, 4 interactions with chain i, 2 interactions with chain j, 2 interactions with chain M, 3 interactions with chain Y, 2 interactions with chain c- Hydrophobic interactions: L:L.528, L:F.532, j:L.114, j:L.114, M:P.200, M:F.201, Y:L.154, Y:V.155, Y:V.155, c:W.79, c:Y.95
- Hydrogen bonds: L:Y.536, i:H.10, i:R.12
- Water bridges: L:L.535
- Salt bridges: i:R.12, i:R.12
CDL.16: 34 residues within 4Å:- Chain 3: Y.9, L.12, C.13, M.15, V.16, I.19, G.20, V.23, I.24
- Chain M: P.12, L.13, L.15, S.16, F.17, R.20, Y.92, R.93, S.96, C.100, L.120, S.123, L.126, L.127, I.130
- Chain N: F.282, A.285, I.286, F.297, Y.341, N.358, T.361, W.362, T.365
- Chain d: L.120
23 PLIP interactions:8 interactions with chain M, 7 interactions with chain 3, 8 interactions with chain N- Hydrophobic interactions: M:F.17, M:L.126, M:L.127, 3:Y.9, 3:L.12, 3:M.15, 3:V.16, 3:V.16, 3:I.19, N:F.282, N:A.285, N:I.286, N:F.297, N:T.361, N:W.362
- Hydrogen bonds: M:Y.92, 3:V.23
- Salt bridges: M:R.20, M:R.93, M:R.93, M:R.93
- Water bridges: N:K.281, N:F.282
CDL.19: 29 residues within 4Å:- Chain 3: L.50, V.53, Y.57, R.64
- Chain 5: V.53, S.85, Y.89
- Chain 8: D.47, V.73
- Chain N: I.41, V.44, G.45, V.47, Y.48, D.49, I.50, P.51, A.53, I.54, W.56, C.57, S.258, W.259, F.262, S.263, L.298, M.363, M.371
- Ligands: PC7.20
22 PLIP interactions:12 interactions with chain N, 8 interactions with chain 3, 1 interactions with chain 5, 1 interactions with chain 8- Hydrophobic interactions: N:I.41, N:V.47, N:I.50, N:I.50, N:A.53, N:I.54, N:W.56, N:W.259, N:F.262, N:F.262, 3:L.50, 3:V.53, 3:V.53, 3:Y.57, 3:Y.57, 5:Y.89
- Hydrogen bonds: N:D.49, N:I.50, 3:Y.57, 3:R.64, 3:R.64, 8:D.47
CDL.27: 30 residues within 4Å:- Chain 3: G.10, C.13, Y.17, R.32, P.33, W.34, V.35, V.37, T.38, S.39, L.42, G.46, S.47, L.50
- Chain 5: Y.63, K.67
- Chain N: W.359, W.362, V.366, P.370
- Ligands: PC7.20, PC7.32
- Chain n: F.35, M.42
- Chain o: A.15, T.19, A.22, L.23, L.26, K.29
14 PLIP interactions:5 interactions with chain 3, 3 interactions with chain N, 4 interactions with chain o, 1 interactions with chain 5, 1 interactions with chain n- Hydrophobic interactions: 3:Y.17, 3:P.33, 3:W.34, 3:L.50, N:W.362, N:V.366, N:P.370, o:T.19, o:A.22, o:L.26, n:F.35
- Salt bridges: 3:R.32, o:K.29, 5:K.67
CDL.31: 38 residues within 4Å:- Chain N: A.171, P.172, H.174, M.175, W.215, I.219, W.222, L.223, I.226, S.227, Q.230, Y.240
- Chain Y: V.62, L.65, H.69, F.72, V.155
- Ligands: CDL.12, PTY.22
- Chain i: L.5, W.11
- Chain j: Y.83, Y.84, Y.86, V.87, F.90, G.91, F.94, L.109, A.113, L.114, G.116, S.117, L.118, Y.120, R.122, R.123, D.124
34 PLIP interactions:20 interactions with chain j, 3 interactions with chain Y, 10 interactions with chain N, 1 interactions with chain i- Hydrophobic interactions: j:Y.83, j:Y.86, j:F.90, j:F.94, j:A.113, j:L.114, j:L.118, j:Y.120, j:Y.120, j:Y.120, j:R.122, Y:V.62, Y:L.65, Y:V.155, N:W.215, N:I.219, N:I.219, N:W.222, N:L.223, N:I.226, i:L.5
- Hydrogen bonds: j:Y.84, j:Y.84, j:Y.120, j:R.123, j:D.124, N:Q.230, N:Y.240
- Salt bridges: j:R.122, j:R.122, j:R.123, j:R.123, N:H.174
- Water bridges: N:Q.230
- 1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NDP.23: 26 residues within 4Å:- Chain B: K.164
- Chain P: G.34, N.36, G.37, F.38, I.39, R.59, N.61, F.83, I.85, C.104, V.105, G.106, I.107, R.108, Y.114, V.119, V.143, S.144, E.145, R.156, K.160, P.179, G.180, V.182, Y.188
28 PLIP interactions:23 interactions with chain P, 5 interactions with chain B- Hydrophobic interactions: P:P.179, P:V.182
- Hydrogen bonds: P:G.34, P:N.36, P:N.36, P:G.37, P:F.38, P:I.39, P:N.61, P:G.106, P:R.156, P:K.160, P:V.182, P:Y.188
- Water bridges: P:G.40, P:R.59, P:R.59, P:I.85, P:E.145, P:R.156, B:K.164, B:K.164, B:K.164, B:K.164
- Salt bridges: P:R.59, P:R.108, B:K.164
- pi-Cation interactions: P:R.59
- 1 x ZN: ZINC ION(Non-covalent)
ZN.24: 5 residues within 4Å:- Chain R: S.85, G.87, C.95, C.113, T.116
2 PLIP interactions:2 interactions with chain R- Metal complexes: R:S.85, R:C.113
- 2 x 8Q1: S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate(Non-covalent)
8Q1.25: 20 residues within 4Å:- Chain U: D.79, S.80, L.81
- Chain W: C.20, Q.21, A.23, R.24, L.26, I.37, K.59, F.60, N.63, S.64, V.66, T.72, L.75, G.79, E.82, Y.86, Y.100
12 PLIP interactions:10 interactions with chain W, 2 interactions with chain U- Hydrophobic interactions: W:I.37, W:K.59, W:F.60, W:F.60, W:T.72, W:Y.86, W:Y.100
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 7 x PC7: (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE(Non-covalent)
- 6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 7 x PTY: PHOSPHATIDYLETHANOLAMINE(Non-covalent)
- 5 x CDL: CARDIOLIPIN(Non-covalent)
- 1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 1 x ZN: ZINC ION(Non-covalent)
- 2 x 8Q1: S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate(Non-covalent)