SMTL ID : 7z9w.1

BRD4 in complex with FragLite1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.99 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: L.53, L.55, Y.58, Y.100, N.101, I.107 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.101 GOL.2: 8 residues within 4Å: Chain A: I.61, I.62, K.63, T.64, T.92, T.95, N.96, I.99 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.61, A:K.63, A:T.64, A:T.95 Water bridges: A:T.64

1 x BYZ: 4-bromo-1H-pyrazole(Non-covalent)

BYZ.3: 5 residues within 4Å: Chain A: M.4, A.50, V.51, N.54, P.56 1 PLIP interactions: 1 interactions with chain A Water bridges: A:M.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davison, G. et al., Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions. J.Med.Chem. (2022)

Release Date

2022-12-07

Peptides

Isoform C of Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Isoform C of Bromodomain-containing protein 4

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