SMTL ID : 7zad.1

BRD4 in complex with FragLite12

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.07 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: I.61, I.62, K.63, T.64, T.92, T.95, N.96, I.99 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.61, A:K.63, A:T.64, A:T.95 Water bridges: A:T.64 GOL.2: 8 residues within 4Å: Chain A: V.48, L.53, L.55, Y.58, Y.100, N.101, I.107 Ligands: IJL.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.101, A:N.101

1 x IJL: 4-iodanylbenzamide(Non-covalent)

IJL.3: 6 residues within 4Å: Chain A: W.42, P.43, Q.46, L.53, I.107 Ligands: GOL.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.42, A:L.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davison, G. et al., Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions. J.Med.Chem. (2022)

Release Date

2022-11-23

Peptides

Isoform C of Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Isoform C of Bromodomain-containing protein 4

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