SMTL ID : 7zaq.1

BRD4 in complex with FragLite19

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.11 Å

Oligo State

monomer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: I.61, I.62, K.63, T.64, N.96, I.99 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.63, A:T.64, A:T.64 Water bridges: A:T.95, A:T.95 GOL.2: 2 residues within 4Å: Chain A: H.3, M.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.3 GOL.3: 9 residues within 4Å: Chain A: R.19, Q.20, L.24, Q.25, L.28, R.29, L.75, N.78, Y.80 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.19

1 x 3Z7: 4-bromo-2-methoxyphenol(Non-covalent)

3Z7.4: 10 residues within 4Å: Chain A: P.43, V.48, L.53, L.55, Y.58, N.96, C.97, Y.100, N.101, I.107 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.48, A:Y.58, A:I.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davison, G. et al., Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions. J.Med.Chem. (2022)

Release Date

2022-11-23

Peptides

Isoform C of Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isoform C of Bromodomain-containing protein 4

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