SMTL ID : 7zbd.2 (1 other biounit)

HaloTag with TRaQ-G ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: D.187, R.190, E.191, L.194 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.187, A:R.190

1 x ILU: [7-azanyl-10-[5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]-2-(cyanocarbamoyl)phenyl]-5,5-dimethyl-benzo[b][1]benzosilin-3-ylidene]-methyl-azanium(Covalent)

ILU.2: 28 residues within 4Å: Chain A: N.41, D.106, W.107, I.132, D.139, E.140, W.141, P.142, E.143, F.144, A.145, R.146, F.149, F.168, T.172, M.175, G.176, L.209, P.243, G.244, V.245, L.246, I.247, P.248, L.271, N.272, L.273 Ligands: CL.3 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.106, A:P.142, A:E.143, A:F.144, A:F.144, A:P.243, A:P.243, A:L.246, A:N.272 Hydrogen bonds: A:E.140, A:F.144

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 7 residues within 4Å: Chain A: N.41, W.107, F.168, F.205, P.206, L.209 Ligands: ILU.2 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Emmert, S. et al., A locally activatable sensor for robust quantification of organellar glutathione. Nat.Chem. (2023)

Release Date

2023-02-01

Peptides

Haloalkane dehalogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Haloalkane dehalogenase

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