- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Covalent)
CL0.1: 25 residues within 4Å:- Chain A: Y.455, F.540, Y.599, N.600, I.604, F.607, I.642, W.645, L.650, A.654, I.658, F.672, G.675, H.676, F.679, Y.731, T.738, T.739, F.742
- Chain B: F.617, L.621, W.622
- Ligands: CLA.2, CLA.55, CLA.60
18 PLIP interactions:15 interactions with chain A, 3 interactions with chain B,- Hydrophobic interactions: A:Y.455, A:F.540, A:I.604, A:I.642, A:W.645, A:L.650, A:A.654, A:I.658, A:F.672, A:F.679, A:F.679, A:T.738, A:F.742, B:F.617, B:F.617, B:L.621
- pi-Stacking: A:F.672
- Metal complexes: A:H.676
- 101 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
CLA.2: 23 residues within 4Å:- Chain A: I.670, L.673, A.674, H.676, F.677, A.680
- Chain B: L.432, V.436, V.440, F.578, W.579, N.582, W.586, L.613, F.617
- Ligands: CL0.1, CLA.3, CLA.4, CLA.10, CLA.29, CLA.42, 45D.57, CLA.60
10 PLIP interactions:7 interactions with chain B, 3 interactions with chain A,- Hydrophobic interactions: B:L.432, B:V.440, B:W.579, B:W.579, B:N.582, B:L.613, A:L.673, A:F.677, A:A.680
- pi-Stacking: B:W.586
CLA.3: 26 residues within 4Å:- Chain A: F.677, A.680, F.681, L.683, M.684, F.687, Y.692, W.693, L.696
- Chain B: S.421, S.424, L.425, G.428, F.429, L.432, L.522, L.529, I.530, L.575, F.578, W.579
- Ligands: CLA.2, CLA.4, CLA.42, 45D.57, BCR.115
14 PLIP interactions:7 interactions with chain B, 7 interactions with chain A,- Hydrophobic interactions: B:L.425, B:L.432, B:I.530, B:L.575, B:L.575, B:F.578, A:F.677, A:A.680, A:F.681, A:L.683, A:F.687, A:Y.692, A:W.693
- pi-Stacking: B:W.579
CLA.4: 23 residues within 4Å:- Chain A: P.31, I.48, L.51, H.52
- Chain F: V.123
- Chain H: A.11, P.12, I.15, L.19
- Ligands: CLA.2, CLA.3, CLA.5, CLA.12, CLA.29, CLA.41, CLA.42, PQN.44, LHG.50, 45D.57, CLA.114, BCR.115, CLA.116, BCR.125
9 PLIP interactions:5 interactions with chain A, 1 interactions with chain F, 3 interactions with chain H,- Hydrophobic interactions: A:P.31, A:I.48, A:L.51, F:V.123, H:P.12, H:I.15, H:L.19
- pi-Cation interactions: A:H.52
- Metal complexes: A:H.52
CLA.5: 21 residues within 4Å:- Chain A: W.28, H.33, F.34, L.51, H.52, A.55, H.56, A.75, G.78, H.79, V.82
- Ligands: CLA.4, CLA.6, CLA.7, CLA.8, CLA.9, CLA.10, CLA.12, CLA.31, LHG.50, BCR.122
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.28, A:L.51, A:A.55, A:V.82
- Salt bridges: A:H.33
- Metal complexes: A:H.56
CLA.6: 23 residues within 4Å:- Chain A: H.56, F.58, I.72, A.75, H.76, H.79, L.80, V.83, F.84, W.348, H.349, Q.351, L.352, N.355, L.359
- Ligands: CLA.5, CLA.7, CLA.14, CLA.15, CLA.26, CLA.31, BCR.45, BCR.46
17 PLIP interactions:17 interactions with chain A,- Hydrophobic interactions: A:F.58, A:I.72, A:I.72, A:A.75, A:L.80, A:V.83, A:F.84, A:F.84, A:W.348, A:Q.351, A:L.352, A:L.352
- Hydrogen bonds: A:N.355
- Salt bridges: A:H.79
- pi-Cation interactions: A:H.76, A:H.76
- Metal complexes: A:H.76
CLA.7: 15 residues within 4Å:- Chain A: H.56, H.79, V.82, V.83, W.86, F.399, L.400
- Ligands: CLA.5, CLA.6, CLA.9, CLA.29, CLA.30, CLA.31, BCR.46, BCR.122
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:V.82, A:V.83, A:W.86, A:W.86, A:F.399, A:L.400
- Hydrogen bonds: A:H.56
- pi-Stacking: A:H.79
- Metal complexes: A:H.79
CLA.8: 17 residues within 4Å:- Chain A: W.86, S.88, G.89, F.92, H.93, F.97, V.116, W.118
- Chain H: M.16, A.17
- Ligands: CLA.5, CLA.9, CLA.10, BCR.49, BCR.122, CLA.123, BCR.125
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain H,- Hydrophobic interactions: A:F.92, A:F.92, A:F.97, H:M.16
- pi-Stacking: A:H.93, A:H.93, A:F.97
- Metal complexes: A:H.93
CLA.9: 23 residues within 4Å:- Chain A: M.90, A.114, Q.115, Q.138, I.139, T.140, S.141, L.143, A.667, Y.668, W.740
- Ligands: CLA.5, CLA.7, CLA.8, CLA.10, CLA.12, CLA.29, CLA.31, CLA.42, LHG.50, 45D.57, BCR.122, BCR.125
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:A.667, A:Y.668, A:W.740
- Hydrogen bonds: A:T.140, A:S.141
CLA.10: 21 residues within 4Å:- Chain A: Q.115, V.116, V.117, W.118, Q.123, L.126, I.137, A.667, I.670, M.671
- Chain B: F.444
- Chain H: I.27
- Ligands: CLA.2, CLA.5, CLA.8, CLA.9, CLA.29, BCR.49, CLA.91, BCR.122, BCR.125
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain B,- Hydrophobic interactions: A:V.117, A:V.117, A:I.137, A:A.667, A:I.670, B:F.444
- Hydrogen bonds: A:Q.115, A:W.118, A:Q.123
CLA.11: 13 residues within 4Å:- Chain A: V.14, V.16, F.73, F.77, M.172, F.174, A.175, F.178, H.179, K.183, W.189
- Ligands: CLA.13, CLA.14
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:V.14, A:F.73, A:F.77, A:F.174, A:A.175, A:F.178, A:W.189
- Salt bridges: A:K.183
- pi-Stacking: A:H.179
- Metal complexes: A:H.179
CLA.12: 20 residues within 4Å:- Chain A: V.21, P.22, T.23, S.24, F.25, K.27, W.28, H.33, K.71, S.74, V.82, V.85, L.173, G.176, W.177, Y.180, H.181
- Ligands: CLA.4, CLA.5, CLA.9
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:T.23, A:F.25, A:K.27, A:W.28, A:V.82, A:V.85, A:W.177
- Hydrogen bonds: A:K.71
- Salt bridges: A:K.27, A:H.33, A:K.71
- pi-Stacking: A:Y.180
- Metal complexes: A:H.181
CLA.13: 14 residues within 4Å:- Chain A: K.11, A.12, K.13, V.14, W.189, N.192, S.195, H.199, T.313, N.314, W.315
- Ligands: CLA.11, CLA.14, CLA.21
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:A.12
- Hydrogen bonds: A:S.195
- pi-Stacking: A:H.199
- Metal complexes: A:H.199
CLA.14: 20 residues within 4Å:- Chain A: F.73, H.76, F.77, L.80, M.172, W.189, F.190, N.192, S.195, M.196, H.199, H.200, G.203, L.204
- Ligands: CLA.6, CLA.11, CLA.13, CLA.26, BCR.45, BCR.46
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:F.73, A:W.189, A:W.189, A:W.189, A:F.190, A:M.196, A:L.204, A:L.204
- pi-Stacking: A:H.200
- Metal complexes: A:H.200
CLA.15: 20 residues within 4Å:- Chain A: S.150, F.152, Q.157, T.161, G.164, V.167, M.168, G.208, G.211, W.212, G.214, H.215, V.219, P.239, H.240
- Ligands: CLA.6, CLA.16, CLA.17, BCR.45, BCR.46
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:F.152, A:T.161, A:V.167, A:W.212, A:H.215, A:V.219
- pi-Stacking: A:W.212
- pi-Cation interactions: A:H.215
- Metal complexes: A:H.215
CLA.16: 11 residues within 4Å:- Chain A: G.214, I.217, H.218, I.243, F.256, G.259, L.260, Y.271
- Ligands: CLA.15, BCR.45, BCR.126
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:I.217, A:I.243, A:F.256, A:L.260, A:L.260
- pi-Stacking: A:H.218
- Metal complexes: A:H.218
CLA.17: 9 residues within 4Å:- Chain A: Y.156, Q.157, C.160, L.238, H.240, I.243, L.244
- Ligands: CLA.15, BCR.45
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:H.240, A:I.243, A:L.244
- Salt bridges: A:H.240
- pi-Stacking: A:H.240
CLA.18: 21 residues within 4Å:- Chain A: F.263, W.268, G.269, Y.271, S.272, L.275, F.277, H.295, L.298, A.299, V.302, L.303, N.500
- Chain I: V.10, P.11, L.78
- Ligands: CLA.19, CLA.23, CLA.37, CLA.58, BCR.129
16 PLIP interactions:3 interactions with chain I, 13 interactions with chain A,- Hydrophobic interactions: I:V.10, I:L.78, I:L.78, A:F.263, A:W.268, A:W.268, A:W.268, A:L.275, A:L.298, A:A.299, A:V.302, A:L.303
- pi-Stacking: A:W.268, A:H.295, A:H.295
- Metal complexes: A:H.295
CLA.19: 19 residues within 4Å:- Chain A: T.276, F.277, L.288, D.292, T.293, H.295, H.296, A.299, I.300, H.369, M.373, P.375
- Ligands: CLA.18, CLA.20, CLA.22, CLA.28, CLA.36, CLA.37, CLA.58
10 PLIP interactions:10 interactions with chain A,- Hydrophobic interactions: A:F.277, A:F.277, A:F.277, A:D.292, A:T.293, A:A.299, A:I.300
- pi-Cation interactions: A:H.296, A:H.296
- Metal complexes: A:H.296
CLA.20: 21 residues within 4Å:- Chain A: L.146, L.205, G.208, S.209, W.212, Q.216, T.293, H.296, H.297, I.300, F.304, L.362, V.366, P.375, Y.376
- Ligands: CLA.19, CLA.22, CLA.28, CLA.30, CLA.36, BCR.46
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:W.212, A:W.212, A:T.293, A:I.300, A:F.304, A:V.366, A:P.375, A:P.375
- pi-Stacking: A:W.212
- pi-Cation interactions: A:H.297
- Metal complexes: A:H.297
CLA.21: 16 residues within 4Å:- Chain A: N.198, H.199, A.202, G.203, L.207, H.309, T.313, W.315, I.317
- Chain I: L.63, G.64
- Ligands: CLA.13, BCR.45, BCR.46, BCR.126, BCR.129
8 PLIP interactions:7 interactions with chain A, 1 interactions with chain I,- Hydrophobic interactions: A:N.198, A:A.202, A:L.207, A:W.315, I:L.63
- Hydrogen bonds: A:N.198
- pi-Cation interactions: A:H.309
- Metal complexes: A:H.309
CLA.22: 24 residues within 4Å:- Chain A: M.197, L.201, L.205, L.303, F.304, A.307, M.310, Y.311, L.358, L.426, M.429, V.553
- Ligands: CLA.19, CLA.20, CLA.23, CLA.24, CLA.25, CLA.26, CLA.27, CLA.28, CLA.30, CLA.32, BCR.47, BCR.48
9 PLIP interactions:9 interactions with chain A,- Hydrophobic interactions: A:L.201, A:L.205, A:L.303, A:F.304, A:A.307, A:L.358, A:L.426, A:V.553
- Hydrogen bonds: A:Y.311
CLA.23: 18 residues within 4Å:- Chain A: I.306, H.309, M.310, R.312, I.317, G.318, H.319
- Chain I: L.30, F.34, T.38, I.39, K.40
- Ligands: CLA.18, CLA.22, CLA.24, CLA.37, CLA.58, BCR.126
10 PLIP interactions:4 interactions with chain I, 6 interactions with chain A,- Hydrophobic interactions: I:T.38, I:I.39, A:I.306, A:M.310, A:I.317
- Hydrogen bonds: I:K.40, A:G.318
- Salt bridges: I:K.40
- pi-Stacking: A:H.319
- Metal complexes: A:H.319
CLA.24: 11 residues within 4Å:- Chain A: H.319, I.324, A.327, H.328
- Ligands: CLA.22, CLA.23, CLA.25, CLA.36, CLA.40, CLA.43, LHG.54
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:I.324
- pi-Stacking: A:H.328
- Metal complexes: A:H.328
CLA.25: 17 residues within 4Å:- Chain A: I.324, L.325, H.337, L.340, L.344, L.425, M.429
- Ligands: CLA.22, CLA.24, CLA.26, CLA.32, CLA.36, CLA.40, CLA.43, BCR.47, BCR.48, LHG.52
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:L.340, A:L.344
- Salt bridges: A:H.328
- pi-Stacking: A:H.337
- Metal complexes: A:H.337
CLA.26: 24 residues within 4Å:- Chain A: H.76, F.190, V.193, M.196, M.197, H.200, M.321, L.344, T.345, T.346, S.347, W.348, Q.351, I.354, N.355, L.358, L.359
- Ligands: CLA.6, CLA.14, CLA.22, CLA.25, CLA.28, CLA.30, BCR.47
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:M.196, A:L.344, A:L.344, A:T.345, A:W.348, A:W.348, A:W.348, A:L.358
CLA.27: 15 residues within 4Å:- Chain A: I.364, I.365, Q.368, I.401, I.542, T.545, S.601, L.602
- Ligands: CLA.22, CLA.28, CLA.38, CLA.39, CLA.40, BCR.48, LHG.52
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:I.364, A:I.364, A:I.401, A:I.401, A:I.542, A:L.602
- Hydrogen bonds: A:Q.368
CLA.28: 20 residues within 4Å:- Chain A: L.358, L.362, I.365, Q.368, H.369, A.372, M.373, A.505, S.506, F.509
- Ligands: CLA.19, CLA.20, CLA.22, CLA.26, CLA.27, CLA.36, CLA.38, CLA.40, BCR.48, CLA.58
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:L.358, A:L.362, A:Q.368, A:A.505, A:F.509, A:F.509
- Metal complexes: A:H.369
CLA.29: 20 residues within 4Å:- Chain A: W.86, M.90, T.140, S.141, S.388, T.391, H.392, W.395, I.396, I.736, W.740
- Ligands: CLA.2, CLA.4, CLA.7, CLA.9, CLA.10, CLA.30, 45D.57, CLA.91, BCR.122
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:H.392, A:W.395, A:I.396, A:I.736, A:W.740
- pi-Stacking: A:H.392
- pi-Cation interactions: A:H.392
- Metal complexes: A:H.392
CLA.30: 19 residues within 4Å:- Chain A: S.141, G.142, L.146, L.359, L.362, T.363, V.366, M.370, Y.376, L.389, H.392, H.393, I.396
- Ligands: CLA.7, CLA.20, CLA.22, CLA.26, CLA.29, BCR.46
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:L.359, A:L.362, A:T.363, A:V.366, A:L.389, A:I.396
- Hydrogen bonds: A:Y.376
- pi-Stacking: A:H.392, A:H.393, A:H.393
- Metal complexes: A:H.393
CLA.31: 22 residues within 4Å:- Chain A: H.52, A.53, H.56, D.57, H.349, L.352, F.399, G.403, A.406, H.407, I.410, R.414, F.570, R.571, W.588
- Ligands: CLA.5, CLA.6, CLA.7, CLA.9, CLA.42, LHG.50, 45D.57
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:D.57, A:L.352, A:L.352, A:A.406
- Hydrogen bonds: A:R.571
- Salt bridges: A:R.414, A:R.571
- Metal complexes: A:H.407
CLA.32: 17 residues within 4Å:- Chain A: F.332, T.333, L.425, R.428, M.429, H.432, I.436, H.439
- Chain J: V.8, L.20, T.22
- Ligands: CLA.22, CLA.25, CLA.33, CLA.40, CLA.43, LHG.52
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain J,- Hydrophobic interactions: A:F.332, A:L.425, A:I.436, A:H.439, J:V.8, J:T.22
- Hydrogen bonds: A:R.428
- Salt bridges: A:R.428, A:H.432
- Metal complexes: A:H.432
CLA.33: 21 residues within 4Å:- Chain A: A.435, H.439, W.442
- Chain B: W.677, A.678, R.681, T.682, P.683
- Chain J: H.19, L.20, T.22, I.24, F.33, I.34
- Ligands: CLA.32, CLA.35, CLA.39, LHG.52, CLA.56, EQ3.110, CLA.131
12 PLIP interactions:5 interactions with chain J, 5 interactions with chain A, 2 interactions with chain B,- Hydrophobic interactions: J:I.24, J:I.24, J:F.33, J:I.34, A:W.442, B:W.677, B:T.682
- Salt bridges: J:H.19
- pi-Stacking: A:H.439
- pi-Cation interactions: A:H.439, A:H.439
- Metal complexes: A:H.439
CLA.34: 20 residues within 4Å:- Chain A: W.442, I.445, F.446, F.449, H.450
- Chain B: I.21, W.22
- Chain J: L.68
- Ligands: CLA.35, CLA.39, LMG.51, CLA.56, CLA.61, CLA.97, CLA.98, PQN.100, BCR.105, EQ3.110, BCR.121, BCR.133
9 PLIP interactions:6 interactions with chain A, 1 interactions with chain J, 2 interactions with chain B,- Hydrophobic interactions: A:W.442, A:F.446, A:F.449, A:F.449, J:L.68, B:I.21, B:W.22
- pi-Stacking: A:H.450
- Metal complexes: A:H.450
CLA.35: 27 residues within 4Å:- Chain A: F.449, H.450, G.453, L.454, I.456, H.457, T.460, M.461, R.466, D.469, F.471
- Chain B: H.95
- Chain J: P.64, W.65, L.68, G.69, P.70, R.72
- Ligands: CLA.33, CLA.34, LMG.51, CLA.67, CLA.68, EQ3.110, BCR.121, CLA.131, CLA.132
12 PLIP interactions:3 interactions with chain J, 9 interactions with chain A,- Hydrophobic interactions: J:P.64, J:W.65, A:L.454, A:H.457, A:F.471
- Salt bridges: J:R.72, A:H.457, A:R.466
- Hydrogen bonds: A:R.466, A:R.466
- pi-Stacking: A:H.457
- Metal complexes: A:H.457
CLA.36: 19 residues within 4Å:- Chain A: W.485, V.486, L.489, H.490, A.493, T.497, A.498, F.509
- Ligands: CLA.19, CLA.20, CLA.24, CLA.25, CLA.28, CLA.37, CLA.38, CLA.40, BCR.47, BCR.48, CLA.58
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:W.485, A:L.489, A:T.497, A:F.509
- Metal complexes: A:H.490
CLA.37: 11 residues within 4Å:- Chain A: F.277, T.497, A.498, P.499, N.500
- Ligands: CLA.18, CLA.19, CLA.23, CLA.36, BCR.48, CLA.58
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:T.497, A:A.498, A:P.499
- Hydrogen bonds: A:N.500
- Metal complexes: A:T.497
CLA.38: 22 residues within 4Å:- Chain A: Q.368, Y.371, F.482, A.483, V.486, Q.487, F.509, I.525, L.527, H.535, H.538, I.542, V.605, H.608, F.609, K.612
- Ligands: CLA.27, CLA.28, CLA.36, CLA.39, CLA.40, LHG.52
14 PLIP interactions:14 interactions with chain A,- Hydrophobic interactions: A:F.482, A:A.483, A:I.525, A:L.527, A:H.538, A:I.542, A:V.605, A:F.609, A:K.612
- Hydrogen bonds: A:Q.487
- pi-Stacking: A:H.535, A:H.535
- pi-Cation interactions: A:H.608
- Metal complexes: A:H.535
CLA.39: 20 residues within 4Å:- Chain A: W.442, F.446, L.447, Q.479, P.480, I.481, F.482, A.483, F.532, H.535, H.536, A.539, H.543
- Ligands: CLA.27, CLA.33, CLA.34, CLA.38, CLA.40, LMG.51, LHG.52
12 PLIP interactions:12 interactions with chain A,- Hydrophobic interactions: A:W.442, A:F.446, A:L.447, A:L.447, A:F.482, A:F.482
- Hydrogen bonds: A:F.482, A:A.483
- Salt bridges: A:H.535
- pi-Stacking: A:F.532, A:H.536
- Metal complexes: A:H.536
CLA.40: 19 residues within 4Å:- Chain A: I.436, L.440, W.442, V.443, A.539, I.542, H.543
- Ligands: CLA.24, CLA.25, CLA.27, CLA.28, CLA.32, CLA.36, CLA.38, CLA.39, BCR.47, BCR.48, LHG.52, CLA.58
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:L.440, A:L.440, A:W.442, A:V.443, A:I.542
- Salt bridges: A:H.543
- pi-Stacking: A:H.543
- Metal complexes: A:H.543
CLA.41: 19 residues within 4Å:- Chain A: I.700, A.703, H.704, L.707, V.709
- Chain B: S.418, S.421, W.422, L.425
- Chain F: G.102, G.105, R.106, Y.108
- Ligands: CLA.4, CLA.89, CLA.90, CLA.114, BCR.115, CLA.116
8 PLIP interactions:5 interactions with chain A, 2 interactions with chain F, 1 interactions with chain B,- Hydrophobic interactions: A:I.700, A:I.700, A:L.707, F:Y.108, F:Y.108, B:L.425
- pi-Stacking: A:H.704
- Metal complexes: A:H.704
CLA.42: 21 residues within 4Å:- Chain A: W.49, F.677, F.681, L.718, Q.722, V.726, A.729, H.730, L.733
- Chain H: L.19, A.23
- Ligands: CLA.2, CLA.3, CLA.4, CLA.9, CLA.31, PQN.44, LHG.50, 45D.57, BCR.122, BCR.125
10 PLIP interactions:8 interactions with chain A, 2 interactions with chain H,- Hydrophobic interactions: A:W.49, A:F.677, A:F.681, A:L.718, A:V.726, H:L.19, H:A.23
- Hydrogen bonds: A:Q.722
- pi-Stacking: A:H.730
- Metal complexes: A:H.730
CLA.43: 9 residues within 4Å:- Chain A: H.328, K.329, P.331, F.332
- Ligands: CLA.24, CLA.25, CLA.32, LHG.52, LHG.54
3 PLIP interactions:3 interactions with chain A,- Hydrophobic interactions: A:H.328, A:P.331, A:F.332
CLA.55: 22 residues within 4Å:- Chain A: F.452, I.456, D.459, F.540, F.596, W.597, N.600, I.642, L.646, Y.731
- Chain B: W.645, L.648, F.649, H.651, L.652, A.655
- Ligands: CL0.1, CLA.60, CLA.61, CLA.67, CLA.68, BCR.105
12 PLIP interactions:3 interactions with chain B, 9 interactions with chain A,- Hydrophobic interactions: B:W.645, B:L.652, B:A.655, A:F.452, A:F.452, A:I.456, A:I.456, A:F.540, A:W.597, A:W.597, A:I.642, A:I.642
CLA.56: 20 residues within 4Å:- Chain A: S.438, N.441, W.442, I.445
- Chain B: I.675, A.678, H.679, T.682, A.685, V.688
- Chain J: L.61, L.88
- Ligands: CLA.33, CLA.34, CLA.97, CLA.98, BCR.105, EQ3.110, CLA.131, BCR.133
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain J,- Hydrophobic interactions: B:I.675, B:I.675, B:T.682, B:A.685, B:V.688, J:L.61, J:L.88
- pi-Stacking: B:H.679
CLA.58: 13 residues within 4Å:- Chain A: N.500
- Chain I: L.72, G.75, V.76, G.79, N.82
- Ligands: CLA.18, CLA.19, CLA.23, CLA.28, CLA.36, CLA.37, CLA.40
2 PLIP interactions:2 interactions with chain I,- Hydrophobic interactions: I:L.72, I:V.76
CLA.60: 20 residues within 4Å:- Chain A: L.646, L.650
- Chain B: Y.435, A.519, W.586, F.589, L.613, W.616, S.625, I.629, F.647, H.651, W.654, Y.714, T.717, Y.718, F.721
- Ligands: CL0.1, CLA.2, CLA.55
15 PLIP interactions:12 interactions with chain B, 3 interactions with chain A,- Hydrophobic interactions: B:Y.435, B:A.519, B:W.586, B:L.613, B:W.616, B:W.616, B:I.629, B:W.654, B:W.654, B:Y.714, B:F.721, A:L.646, A:L.650, A:L.650
- Metal complexes: B:H.651
CLA.61: 24 residues within 4Å:- Chain A: N.441, C.444, I.445, G.448, F.449, F.452, F.540, L.547, I.548, L.593, F.596, W.597
- Chain B: L.652, A.655, T.656, F.658, M.659, Y.667, W.668, L.671
- Ligands: CLA.34, CLA.55, CLA.98, BCR.105
11 PLIP interactions:6 interactions with chain A, 5 interactions with chain B,- Hydrophobic interactions: A:F.449, A:I.548, A:L.593, A:F.596, B:L.652, B:A.655, B:F.658, B:Y.667, B:W.668
- pi-Stacking: A:W.597, A:W.597
CLA.62: 18 residues within 4Å:- Chain B: K.7, F.8, I.25, A.28, H.29, F.31, K.45, H.53, I.56
- Chain K: S.26, L.29, Y.30
- Ligands: CLA.63, CLA.64, LMG.107, BCR.121, BCR.133, ECH.134
11 PLIP interactions:3 interactions with chain K, 8 interactions with chain B,- Hydrophobic interactions: K:L.29, K:L.29, K:Y.30, B:I.25, B:A.28, B:F.31, B:I.56
- Salt bridges: B:K.7, B:H.34, B:K.45
- Metal complexes: B:H.29
CLA.63: 22 residues within 4Å:- Chain B: H.29, F.31, Y.43, I.46, S.49, H.50, H.53, I.54, R.174, L.182, L.328, H.329, Q.331, L.332, A.335, L.339
- Ligands: CLA.62, CLA.64, CLA.71, CLA.82, CLA.87, BCR.102
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:F.31, B:F.31, B:Y.43, B:I.46, B:I.46, B:I.46, B:H.53, B:L.182, B:L.328, B:Q.331, B:L.332, B:L.332, B:L.339
- Salt bridges: B:H.53
- pi-Stacking: B:H.50
- Metal complexes: B:H.50
CLA.64: 14 residues within 4Å:- Chain B: H.29, H.53, I.57, W.60, L.339, L.380
- Ligands: CLA.62, CLA.63, CLA.66, CLA.85, CLA.86, CLA.87, BCR.102, LMG.107
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:I.57, B:I.57, B:W.60, B:W.60, B:L.339, B:L.380
- Salt bridges: B:H.29
- pi-Cation interactions: B:H.53
- Metal complexes: B:H.53
CLA.65: 18 residues within 4Å:- Chain B: G.63, F.66, H.67, W.70, Q.71, W.92
- Chain G: L.10, P.11, L.14, I.15, V.18
- Chain K: A.11, L.12, A.15
- Ligands: CLA.66, CLA.67, BCR.121, ECH.134
13 PLIP interactions:7 interactions with chain B, 4 interactions with chain G, 2 interactions with chain K,- Hydrophobic interactions: B:F.66, B:F.66, B:W.70, G:L.10, G:L.14, G:L.14, G:I.15, K:L.12, K:A.15
- Hydrogen bonds: B:Q.71
- Salt bridges: B:H.67
- pi-Stacking: B:H.67
- Metal complexes: B:H.67
CLA.66: 22 residues within 4Å:- Chain B: W.60, T.64, H.67, V.68, A.88, H.89, N.114, I.115, A.116, Y.117, S.118, V.120, V.642, W.643, M.646
- Ligands: CLA.64, CLA.65, CLA.67, CLA.85, CLA.87, BCR.105, BCR.121
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:A.88, B:A.88, B:V.642, B:W.643
- Hydrogen bonds: B:Y.117, B:S.118
- pi-Stacking: B:H.89
- Metal complexes: B:H.89
CLA.67: 28 residues within 4Å:- Chain A: T.460, A.463, L.464
- Chain B: H.89, A.90, I.91, W.92, D.93, P.94, H.95, F.96, N.114, S.641, V.642, W.645
- Chain G: T.26, M.27
- Ligands: CLA.35, CLA.55, CLA.65, CLA.66, CLA.68, CLA.87, CLA.98, BCR.105, LMG.107, BCR.121, BCR.133
11 PLIP interactions:7 interactions with chain B, 3 interactions with chain A, 1 interactions with chain G,- Hydrophobic interactions: B:I.91, B:I.91, B:V.642, A:T.460, A:A.463, A:L.464, G:T.26
- Hydrogen bonds: B:H.89, B:W.92
- pi-Stacking: B:F.96
- Metal complexes: B:D.93
CLA.68: 14 residues within 4Å:- Chain B: P.94, H.95
- Chain G: G.19, W.20
- Chain J: W.65, P.70, L.71, I.83, A.87
- Ligands: CLA.35, CLA.55, CLA.67, EQ3.110, BCR.121
5 PLIP interactions:1 interactions with chain B, 2 interactions with chain J, 2 interactions with chain G,- Metal complexes: B:H.95
- Hydrophobic interactions: J:L.71, J:A.87, G:W.20
- pi-Stacking: G:W.20
CLA.69: 13 residues within 4Å:- Chain B: F.47, F.51, F.151, A.152, L.155, H.156, K.160, F.161, P.163, W.167
- Chain L: F.295
- Ligands: CLA.70, CLA.71
12 PLIP interactions:11 interactions with chain B, 1 interactions with chain L,- Hydrophobic interactions: B:F.47, B:F.51, B:F.151, B:A.152, B:L.155, B:F.161, B:P.163, B:W.167, B:W.167, L:F.295
- pi-Cation interactions: B:H.156
- Metal complexes: B:H.156
CLA.70: 10 residues within 4Å:- Chain B: W.167, N.170, S.173, H.177, T.293, W.295
- Ligands: CLA.69, CLA.71, CLA.78, BCR.102
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:W.295
- Hydrogen bonds: B:S.173
- pi-Stacking: B:H.177, B:H.177
- Metal complexes: B:H.177
CLA.71: 24 residues within 4Å:- Chain B: F.47, H.50, F.51, I.54, W.123, W.167, F.168, N.170, S.173, R.174, H.177, H.178, G.181, L.182, F.183, I.342, Y.356
- Ligands: CLA.63, CLA.69, CLA.70, CLA.76, CLA.82, CLA.86, BCR.102
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:F.47, B:I.54, B:W.123, B:W.167, B:W.167, B:F.168, B:R.174, B:R.174, B:L.182, B:F.183, B:I.342
- Hydrogen bonds: B:H.50
- pi-Stacking: B:H.178, B:H.178
- Metal complexes: B:H.178
CLA.72: 19 residues within 4Å:- Chain B: I.127, G.128, M.129, E.134, F.141, S.186, A.189, W.190, G.192, H.193, H.196, V.197, V.207, G.208, W.209, F.212
- Ligands: CLA.73, CLA.86, ECH.103
16 PLIP interactions:16 interactions with chain B,- Hydrophobic interactions: B:I.127, B:F.141, B:A.189, B:W.190, B:H.193, B:H.196, B:V.197, B:W.209, B:W.209, B:F.212
- Hydrogen bonds: B:W.209
- pi-Stacking: B:W.190, B:H.193, B:W.209
- pi-Cation interactions: B:H.193
- Metal complexes: B:H.193
CLA.73: 20 residues within 4Å:- Chain B: L.188, G.192, V.195, H.196, F.212, L.213, S.214, T.215, P.216, P.217, G.221, L.222, F.226, I.254, L.255, L.278
- Ligands: CLA.72, CLA.78, BCR.101, ECH.103
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:L.188, B:V.195, B:F.212, B:L.213, B:L.222, B:F.226, B:I.254, B:L.255, B:L.278
- pi-Stacking: B:H.196
- Metal complexes: B:H.196
CLA.74: 14 residues within 4Å:- Chain B: F.225, W.230, G.231, A.234, L.255, F.257, H.275, L.278, A.279, V.282, A.489
- Ligands: CLA.75, BCR.101, LMG.109
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:W.230, B:W.230, B:W.230, B:A.234, B:L.255, B:L.278, B:A.279, B:V.282
- Hydrogen bonds: B:F.257
- pi-Stacking: B:H.275
- Metal complexes: B:H.275
CLA.75: 16 residues within 4Å:- Chain B: F.257, L.268, D.272, I.273, H.275, H.276, I.280, H.349, L.353, W.494
- Ligands: CLA.74, CLA.76, CLA.82, CLA.84, CLA.92, CLA.93
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:F.257, B:F.257, B:F.257, B:I.273, B:I.280, B:W.494
- pi-Stacking: B:H.276
- Metal complexes: B:H.276
CLA.76: 21 residues within 4Å:- Chain B: W.123, T.126, I.127, F.183, S.186, S.187, W.190, I.273, H.276, H.277, I.280, L.345, V.346, H.349, S.355, Y.356
- Ligands: CLA.71, CLA.75, CLA.77, CLA.82, CLA.86
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:W.190, B:W.190, B:I.273, B:I.280, B:L.345, B:V.346
- pi-Stacking: B:W.190
- pi-Cation interactions: B:H.277
- Metal complexes: B:H.277
CLA.77: 18 residues within 4Å:- Chain B: L.175, L.179, F.183, I.283, F.284, A.287, M.290, Y.291, I.301, I.304, L.305
- Ligands: CLA.76, CLA.79, CLA.80, CLA.81, CLA.82, CLA.84, BCR.106
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:L.175, B:L.179, B:F.183, B:I.283, B:F.284, B:A.287
- Hydrogen bonds: B:Y.291
CLA.78: 11 residues within 4Å:- Chain B: N.176, H.177, A.180, V.185, H.289, T.293, W.295, I.297
- Ligands: CLA.70, CLA.73, BCR.101
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:N.176, B:V.185, B:W.295, B:W.295, B:I.297
- Hydrogen bonds: B:N.176
- pi-Stacking: B:H.289, B:H.289
- Metal complexes: B:H.289
CLA.79: 12 residues within 4Å:- Chain B: I.286, H.289, M.290, R.292, I.297, G.298, H.299
- Ligands: CLA.77, CLA.80, CLA.81, BCR.101, BCR.106
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:M.290
- Hydrogen bonds: B:G.298
- Salt bridges: B:R.292
- pi-Stacking: B:H.299
- Metal complexes: B:H.299
CLA.80: 11 residues within 4Å:- Chain B: M.290, H.299, E.303, I.304, A.307, H.308
- Ligands: CLA.77, CLA.79, CLA.81, CLA.99, BCR.106
3 PLIP interactions:3 interactions with chain B,- Hydrophobic interactions: B:I.304
- pi-Stacking: B:H.308
- Metal complexes: B:H.308
CLA.81: 16 residues within 4Å:- Chain B: I.304, L.305, H.308, H.317, L.320, I.324, V.405, L.406, M.409
- Ligands: CLA.77, CLA.79, CLA.80, CLA.82, CLA.88, BCR.106, LHG.108
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:I.324, B:V.405, B:V.405, B:L.406
- Salt bridges: B:H.308
- pi-Cation interactions: B:H.317
- Metal complexes: B:H.317
CLA.82: 19 residues within 4Å:- Chain B: A.171, R.174, L.175, H.178, F.183, F.284, I.301, Y.321, I.324, A.335, S.338, I.342
- Ligands: CLA.63, CLA.71, CLA.75, CLA.76, CLA.77, CLA.81, CLA.84
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:A.171, B:L.175, B:L.175, B:F.183, B:F.284, B:I.301, B:Y.321, B:I.324, B:A.335, B:I.342
- Hydrogen bonds: B:R.174
CLA.83: 17 residues within 4Å:- Chain B: S.344, L.345, Q.348, Q.374, G.378, M.381, V.382, F.385, L.524, L.531, M.580, L.587
- Ligands: CLA.84, CLA.94, CLA.96, BCR.104, LHG.108
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:V.382, B:F.385, B:L.531, B:L.587
- Hydrogen bonds: B:S.344, B:Q.348, B:Q.374
CLA.84: 17 residues within 4Å:- Chain B: V.341, L.345, Q.348, H.349, Y.351, S.352, L.353, L.505
- Ligands: CLA.75, CLA.77, CLA.82, CLA.83, CLA.92, CLA.94, CLA.96, BCR.104, BCR.106
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:V.341, B:L.353, B:L.505
- pi-Cation interactions: B:H.349
- Metal complexes: B:H.349
CLA.85: 19 residues within 4Å:- Chain B: W.60, T.64, Y.117, S.118, A.368, L.369, T.371, H.372, Y.375, F.379, M.646, V.715, Y.718, A.719
- Ligands: CLA.64, CLA.66, CLA.86, CLA.87, LMG.107
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:A.368, B:L.369, B:T.371, B:H.372, B:Y.375, B:Y.375, B:F.379, B:Y.718, B:A.719
- pi-Stacking: B:H.372
- pi-Cation interactions: B:H.372
- Metal complexes: B:H.372
CLA.86: 24 residues within 4Å:- Chain B: W.60, T.61, S.118, G.119, W.123, A.189, L.339, I.342, T.343, V.346, M.350, Y.356, L.369, H.372, H.373, I.376, L.380
- Ligands: CLA.64, CLA.71, CLA.72, CLA.76, CLA.85, BCR.102, ECH.103
13 PLIP interactions:13 interactions with chain B,- Hydrophobic interactions: B:W.60, B:T.61, B:W.123, B:L.339, B:I.342, B:T.343, B:V.346, B:L.369, B:I.376, B:L.380
- Hydrogen bonds: B:Y.356
- pi-Stacking: B:H.373
- Metal complexes: B:H.373
CLA.87: 21 residues within 4Å:- Chain B: A.26, H.29, D.30, H.329, L.332, L.336, F.379, G.383, H.387, I.390, R.394, Y.552, W.570, F.573
- Ligands: CLA.63, CLA.64, CLA.66, CLA.67, CLA.85, CLA.98, LMG.107
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:D.30, B:L.332, B:L.332, B:L.336, B:F.573, B:F.573
- Salt bridges: B:R.394
- Metal complexes: B:H.387
CLA.88: 12 residues within 4Å:- Chain B: L.312, T.313, R.408, M.409, H.412, L.416, H.419
- Ligands: CLA.81, CLA.89, CLA.96, BCR.106, LHG.108
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:T.313, B:H.412, B:L.416
- Hydrogen bonds: B:R.408
- Salt bridges: B:R.408, B:H.412
- pi-Cation interactions: B:H.412
- Metal complexes: B:H.412
CLA.89: 15 residues within 4Å:- Chain A: W.702, K.706, L.707
- Chain B: A.415, H.419, W.422
- Chain F: Y.148, V.154, D.157
- Ligands: CLA.41, CLA.88, CLA.90, CLA.96, LHG.108, ZEX.118
6 PLIP interactions:2 interactions with chain A, 1 interactions with chain F, 3 interactions with chain B,- Hydrophobic interactions: A:L.707, F:Y.148, B:W.422
- Salt bridges: A:K.706
- pi-Cation interactions: B:H.419
- Metal complexes: B:H.419
CLA.90: 18 residues within 4Å:- Chain B: W.422, L.425, F.426, F.429, H.430
- Chain F: F.87, S.91, F.94, L.95, A.98, G.102
- Ligands: CLA.41, 45D.57, CLA.89, CLA.91, CLA.95, BCR.115, ZEX.118
11 PLIP interactions:6 interactions with chain B, 5 interactions with chain F,- Hydrophobic interactions: B:F.426, B:F.426, B:F.429, B:F.429, F:F.87, F:F.94, F:L.95
- pi-Stacking: B:H.430, F:F.94, F:F.94
- Metal complexes: B:H.430
CLA.91: 20 residues within 4Å:- Chain A: V.121
- Chain B: G.433, V.436, H.437, V.440, K.449, I.451
- Chain F: Y.62, I.97
- Chain H: F.29, D.35, L.36, L.37
- Ligands: CLA.10, CLA.29, CLA.90, ZEX.111, BCR.115, CLA.116, BCR.122
12 PLIP interactions:8 interactions with chain B, 2 interactions with chain H, 1 interactions with chain A, 1 interactions with chain F,- Hydrophobic interactions: B:H.437, B:V.440, B:V.440, B:I.451, H:F.29, A:V.121, F:I.97
- Hydrogen bonds: B:K.449, H:D.35
- Salt bridges: B:K.449
- pi-Stacking: B:H.437
- Metal complexes: B:H.437
CLA.92: 13 residues within 4Å:- Chain B: I.461, T.464, S.465, L.475, L.476, W.490, W.494, F.506
- Ligands: CLA.75, CLA.84, CLA.93, CLA.94, BCR.104
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:I.461, B:I.461, B:L.475, B:L.476, B:F.506
CLA.93: 9 residues within 4Å:- Chain B: L.475, I.482, A.483, T.486, A.488, W.490
- Ligands: CLA.75, CLA.92, BCR.104
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:L.475, B:I.482, B:I.482, B:A.483, B:T.486
- Hydrogen bonds: B:T.486
CLA.94: 21 residues within 4Å:- Chain B: Q.348, Y.351, Y.370, F.457, A.458, I.461, Q.462, F.506, L.507, I.509, H.517, I.520, L.587, Y.590, W.591
- Ligands: CLA.83, CLA.84, CLA.92, CLA.95, CLA.96, CLA.117
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:Y.351, B:F.457, B:A.458, B:I.509, B:I.520, B:L.587, B:L.587, B:Y.590, B:Y.590, B:W.591
- pi-Cation interactions: B:H.517
- Metal complexes: B:H.517
CLA.95: 20 residues within 4Å:- Chain B: V.423, F.426, L.427, E.454, P.455, V.456, F.457, A.458, F.514, H.517, H.518, A.521
- Chain F: V.77, F.87, S.91
- Ligands: CLA.90, CLA.94, CLA.96, ZEX.111, ZEX.118
16 PLIP interactions:2 interactions with chain F, 14 interactions with chain B,- Hydrophobic interactions: F:V.77, F:F.87, B:V.423, B:F.426, B:L.427, B:F.457, B:F.457, B:F.514, B:H.517, B:A.521
- Hydrogen bonds: B:F.457, B:A.458
- Salt bridges: B:H.517
- pi-Stacking: B:F.514
- pi-Cation interactions: B:H.518
- Metal complexes: B:H.518
CLA.96: 15 residues within 4Å:- Chain B: L.416, L.420, W.422, V.423, A.521, L.524, H.525, I.532
- Ligands: CLA.83, CLA.84, CLA.88, CLA.89, CLA.94, CLA.95, LHG.108
9 PLIP interactions:9 interactions with chain B,- Hydrophobic interactions: B:L.416, B:L.420, B:L.420, B:W.422, B:V.423, B:L.524, B:I.532
- Salt bridges: B:H.525
- Metal complexes: B:H.525
CLA.97: 23 residues within 4Å:- Chain B: T.18, I.21, W.22, V.676, H.679, V.688, R.689, W.690, K.691, P.694, V.695
- Chain G: F.31, E.35
- Chain J: L.88, Y.99, V.102
- Ligands: CLA.34, CLA.56, CLA.98, PQN.100, EQ3.110, BCR.121, BCR.133
11 PLIP interactions:8 interactions with chain B, 1 interactions with chain J, 2 interactions with chain G,- Hydrophobic interactions: B:T.18, B:I.21, B:W.22, B:V.676, B:W.690, B:W.690, B:P.694, J:L.88, G:F.31
- Hydrogen bonds: B:K.691, G:E.35
CLA.98: 25 residues within 4Å:- Chain B: W.22, F.649, L.652, V.653, T.656, M.659, F.660, L.697, V.705, A.708, H.709, V.712
- Chain G: M.27, G.28
- Ligands: CLA.34, CLA.56, CLA.61, CLA.67, CLA.87, CLA.97, PQN.100, BCR.105, LMG.107, BCR.121, BCR.133
10 PLIP interactions:10 interactions with chain B,- Hydrophobic interactions: B:F.649, B:L.652, B:V.653, B:T.656, B:L.697, B:V.705, B:V.712
- Salt bridges: B:H.709
- pi-Stacking: B:H.709
- Metal complexes: B:H.709
CLA.99: 7 residues within 4Å:- Chain B: H.308, K.309, P.311, L.312
- Ligands: CLA.80, BCR.106, LHG.108
1 PLIP interactions:1 interactions with chain B,- Hydrophobic interactions: B:P.311
CLA.114: 24 residues within 4Å:- Chain A: T.45, I.48, W.49, I.700, V.701, H.704, V.709, P.711, P.715, R.716
- Chain F: Y.108, L.109, E.122, I.125, I.131, M.134
- Chain H: M.14, L.18, F.21
- Ligands: CLA.4, CLA.41, PQN.44, BCR.115, CLA.116
17 PLIP interactions:5 interactions with chain H, 8 interactions with chain A, 4 interactions with chain F,- Hydrophobic interactions: H:M.14, H:L.18, H:F.21, H:F.21, H:F.21, A:T.45, A:I.48, A:W.49, A:I.700, A:V.701, A:P.711, A:P.711, A:P.715, F:L.109, F:I.131, F:I.131, F:M.134
CLA.116: 13 residues within 4Å:- Chain F: I.97, W.100, I.101, V.104, M.134
- Chain H: I.15, L.18, T.22
- Ligands: CLA.4, CLA.41, CLA.91, CLA.114, BCR.115
6 PLIP interactions:2 interactions with chain H, 4 interactions with chain F,- Hydrophobic interactions: H:I.15, H:L.18, F:I.97, F:I.97, F:I.101, F:V.104
CLA.117: 12 residues within 4Å:- Chain B: V.456, F.457, W.460, F.472
- Chain F: D.78, G.79, R.80, F.81, L.88
- Ligands: CLA.94, ZEX.118, LHG.119
9 PLIP interactions:3 interactions with chain F, 6 interactions with chain B,- Hydrophobic interactions: F:R.80, B:V.456, B:F.457, B:F.457, B:F.457, B:W.460, B:F.472
- Hydrogen bonds: F:F.81
- Metal complexes: F:D.78
CLA.123: 8 residues within 4Å:- Chain A: W.118
- Chain H: G.24, I.25, E.28, R.31, F.32
- Ligands: CLA.8, BCR.125
4 PLIP interactions:4 interactions with chain H,- Hydrophobic interactions: H:I.25, H:F.32
- pi-Cation interactions: H:R.31
- Metal complexes: H:E.28
CLA.124: 5 residues within 4Å:- Chain F: I.89, L.93
- Chain H: H.39, P.40
- Ligands: ZEX.111
3 PLIP interactions:2 interactions with chain F, 1 interactions with chain H,- Hydrophobic interactions: F:I.89, F:L.93
- Metal complexes: H:H.39
CLA.127: 10 residues within 4Å:- Chain A: F.264, L.266
- Chain I: W.16, V.20, A.21, M.24, I.25, N.28, H.70
- Ligands: BCR.129
3 PLIP interactions:3 interactions with chain I,- Hydrophobic interactions: I:I.25
- Salt bridges: I:H.70
- Metal complexes: I:H.70
CLA.128: 9 residues within 4Å:- Chain I: I.32, K.36, N.52, F.53, F.54, F.57, V.62, T.65
- Ligands: BCR.129
9 PLIP interactions:9 interactions with chain I,- Hydrophobic interactions: I:I.32, I:K.36, I:F.53, I:F.54, I:F.57, I:V.62, I:T.65
- pi-Stacking: I:F.54
- Metal complexes: I:F.53
CLA.130: 5 residues within 4Å:- Chain J: N.36, R.41, E.52, M.55
- Ligands: CLA.131
3 PLIP interactions:3 interactions with chain J,- Hydrophobic interactions: J:N.36, J:M.55
- pi-Cation interactions: J:R.41
CLA.131: 18 residues within 4Å:- Chain B: P.683, L.684
- Chain J: I.24, I.34, L.37, P.38, A.39, V.53, A.56, H.57, F.60
- Ligands: CLA.33, CLA.35, CLA.56, EQ3.110, CLA.130, CLA.132, BCR.133
12 PLIP interactions:10 interactions with chain J, 2 interactions with chain B,- Hydrophobic interactions: J:I.24, J:I.34, J:L.37, J:A.39, J:A.56, J:F.60, J:F.60, B:L.684, B:L.684
- Hydrogen bonds: J:A.39
- pi-Stacking: J:H.57
- Metal complexes: J:H.57
CLA.132: 9 residues within 4Å:- Chain J: Y.59, F.60, G.63, P.64, T.66, L.67, L.142
- Ligands: CLA.35, CLA.131
7 PLIP interactions:7 interactions with chain J,- Hydrophobic interactions: J:Y.59, J:F.60, J:P.64, J:L.67, J:L.142, J:L.142
- Hydrogen bonds: J:Y.59
CLA.136: 24 residues within 4Å:- Chain L: F.119, Y.147, P.150, A.153, A.154, V.157, M.183, I.184, F.186, Q.187, I.192, L.193, H.198, G.201, V.202, F.206, T.286, A.287, V.290
- Chain M: I.188
- Ligands: CLA.137, PHO.138, CLA.141, CLA.143
15 PLIP interactions:14 interactions with chain L, 1 interactions with chain M,- Hydrophobic interactions: L:Y.147, L:A.153, L:A.154, L:M.183, L:I.184, L:F.186, L:Q.187, L:I.192, L:I.192, L:L.193, L:L.193, L:F.206, M:I.188
- pi-Stacking: L:H.198
- Metal complexes: L:H.198
CLA.137: 13 residues within 4Å:- Chain L: M.199, V.202, A.203, F.206
- Chain M: F.159, V.162, V.181, I.184, F.185, I.188
- Ligands: CLA.136, PHO.142, CLA.143
5 PLIP interactions:4 interactions with chain M, 1 interactions with chain L,- Hydrophobic interactions: M:F.159, M:V.162, M:F.185, M:I.188, L:V.202
CLA.139: 17 residues within 4Å:- Chain L: L.36, T.40, T.43, F.93, Y.94, P.95, I.96, W.97, L.114, F.117, H.118, I.121
- Chain P: V.8, Y.9, V.12, F.15
- Ligands: BCR.140
14 PLIP interactions:4 interactions with chain P, 10 interactions with chain L,- Hydrophobic interactions: P:Y.9, P:Y.9, P:V.12, P:F.15, L:L.36, L:T.40, L:F.93, L:P.95, L:I.96, L:L.114, L:F.117
- Hydrogen bonds: L:I.96
- pi-Cation interactions: L:H.118
- Metal complexes: L:H.118
CLA.141: 16 residues within 4Å:- Chain L: T.45, F.48, I.49, V.157, F.158, M.172, I.176, T.179, F.180, M.183
- Chain M: M.204, V.207, A.208
- Ligands: CLA.136, PHO.138, CLA.143
9 PLIP interactions:7 interactions with chain L, 2 interactions with chain M,- Hydrophobic interactions: L:T.45, L:F.48, L:I.49, L:V.157, L:F.158, L:T.179, L:F.180, M:V.207, M:A.208
CLA.143: 22 residues within 4Å:- Chain L: M.183, F.206
- Chain M: V.158, S.161, V.162, I.188, L.191, Q.192, W.197, T.198, H.203, G.206, V.207, I.210, L.285, S.288, S.289, I.292
- Ligands: CLA.136, CLA.137, CLA.141, PHO.142
14 PLIP interactions:13 interactions with chain M, 1 interactions with chain L,- Hydrophobic interactions: M:V.158, M:I.188, M:L.191, M:Q.192, M:V.207, M:V.207, M:I.210, M:I.210, M:L.285, L:F.206
- pi-Stacking: M:W.197, M:H.203, M:H.203
- Metal complexes: M:H.203
CLA.144: 12 residues within 4Å:- Chain M: L.42, C.46, M.49, L.95, F.97, L.98, W.99, W.110, F.119, L.122, H.123, F.126
10 PLIP interactions:10 interactions with chain M,- Hydrophobic interactions: M:F.97, M:W.99, M:W.99, M:L.122, M:F.126, M:F.126
- Hydrogen bonds: M:L.98
- Salt bridges: M:H.123
- pi-Stacking: M:F.119
- pi-Cation interactions: M:H.123
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
PQN.44: 12 residues within 4Å:- Chain A: M.684, F.685, S.688, R.690, W.693, A.717, L.718, G.723
- Chain H: I.15
- Ligands: CLA.4, CLA.42, CLA.114
10 PLIP interactions:9 interactions with chain A, 1 interactions with chain H- Hydrophobic interactions: A:F.685, A:F.685, A:R.690, A:W.693, A:L.718, A:L.718, H:I.15
- Hydrogen bonds: A:S.688, A:L.718
- pi-Stacking: A:W.693
PQN.100: 17 residues within 4Å:- Chain B: W.22, I.25, M.659, F.660, S.663, W.664, R.665, W.668, I.672, A.696, L.697, A.702
- Ligands: CLA.34, CLA.97, CLA.98, LMG.107, BCR.133
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:W.22, B:W.22, B:I.25, B:R.665, B:R.665, B:W.668, B:W.668, B:W.668, B:W.668, B:I.672, B:L.697, B:A.702
- Hydrogen bonds: B:L.697
- 18 x BCR: BETA-CAROTENE(Non-covalent)
BCR.45: 13 residues within 4Å:- Chain A: L.87, G.165, L.207, L.210, G.211
- Ligands: CLA.6, CLA.14, CLA.15, CLA.16, CLA.17, CLA.21, BCR.46, BCR.126
Ligand excluded by PLIPBCR.46: 13 residues within 4Å:- Chain A: V.83, W.86, G.203, L.207, G.208
- Ligands: CLA.6, CLA.7, CLA.14, CLA.15, CLA.20, CLA.21, CLA.30, BCR.45
Ligand excluded by PLIPBCR.47: 9 residues within 4Å:- Chain A: I.354, F.411
- Ligands: CLA.22, CLA.25, CLA.26, CLA.36, CLA.40, BCR.48, LHG.52
Ligand excluded by PLIPBCR.48: 13 residues within 4Å:- Chain A: A.357, S.361, I.401, L.549, L.550
- Ligands: CLA.22, CLA.25, CLA.27, CLA.28, CLA.36, CLA.37, CLA.40, BCR.47
Ligand excluded by PLIPBCR.49: 4 residues within 4Å:- Chain A: W.118
- Ligands: CLA.8, CLA.10, BCR.125
Ligand excluded by PLIPBCR.101: 11 residues within 4Å:- Chain B: L.188, L.222, F.225, V.282, I.285, I.286, H.289
- Ligands: CLA.73, CLA.74, CLA.78, CLA.79
Ligand excluded by PLIPBCR.102: 11 residues within 4Å:- Chain B: I.57, F.58, F.149, G.181, L.182, V.185
- Ligands: CLA.63, CLA.64, CLA.70, CLA.71, CLA.86
Ligand excluded by PLIPBCR.104: 16 residues within 4Å:- Chain B: F.330, G.333, L.334, A.337, V.341, M.381, A.384, F.385, G.388, F.391, F.392
- Ligands: CLA.83, CLA.84, CLA.92, CLA.93, BCR.106
Ligand excluded by PLIPBCR.105: 12 residues within 4Å:- Chain A: I.445, F.449
- Chain B: W.645, F.649, W.668
- Ligands: CLA.34, CLA.55, CLA.56, CLA.61, CLA.66, CLA.67, CLA.98
Ligand excluded by PLIPBCR.106: 10 residues within 4Å:- Chain B: M.409, I.532
- Ligands: CLA.77, CLA.79, CLA.80, CLA.81, CLA.84, CLA.88, CLA.99, BCR.104
Ligand excluded by PLIPBCR.115: 13 residues within 4Å:- Chain B: F.429
- Chain F: L.93, F.94, I.97
- Ligands: CLA.3, CLA.4, CLA.41, 45D.57, CLA.90, CLA.91, ZEX.111, CLA.114, CLA.116
Ligand excluded by PLIPBCR.121: 13 residues within 4Å:- Chain G: V.18, G.19, P.23
- Ligands: CLA.34, CLA.35, CLA.62, CLA.65, CLA.66, CLA.67, CLA.68, CLA.97, CLA.98, EQ3.110
Ligand excluded by PLIPBCR.122: 11 residues within 4Å:- Chain H: A.23, L.26, N.30
- Ligands: CLA.5, CLA.7, CLA.8, CLA.9, CLA.10, CLA.29, CLA.42, CLA.91
Ligand excluded by PLIPBCR.125: 15 residues within 4Å:- Chain A: W.118, I.120
- Chain H: P.12, V.13, M.16, T.20, I.27, R.31
- Ligands: CLA.4, CLA.8, CLA.9, CLA.10, CLA.42, BCR.49, CLA.123
Ligand excluded by PLIPBCR.126: 17 residues within 4Å:- Chain A: L.260, F.263, V.302, I.305, H.309, I.317
- Chain I: I.39, G.64, T.65, S.67, F.68, I.71
- Ligands: CLA.16, CLA.21, CLA.23, BCR.45, BCR.129
Ligand excluded by PLIPBCR.129: 15 residues within 4Å:- Chain A: F.263, W.268
- Chain I: S.50, F.53, L.63, A.66, S.67, H.70, I.71, A.74
- Ligands: CLA.18, CLA.21, BCR.126, CLA.127, CLA.128
Ligand excluded by PLIPBCR.133: 17 residues within 4Å:- Chain B: I.25, V.688
- Chain G: M.27, L.30, F.31
- Chain J: A.92, A.95, L.96, F.127
- Ligands: CLA.34, CLA.56, CLA.62, CLA.67, CLA.97, CLA.98, PQN.100, CLA.131
Ligand excluded by PLIPBCR.140: 12 residues within 4Å:- Chain L: I.38, P.39, L.42, T.43, T.46, C.47, I.50, A.54, L.102, L.106
- Chain P: F.15
- Ligands: CLA.139
Ligand excluded by PLIP- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Non-functional Binders)
LHG.50: 22 residues within 4Å:- Chain A: W.49, N.50, H.52, A.53, N.54, F.399, R.571, W.588, L.595, S.719, I.721, Q.722, A.725, A.729, L.732, I.736
- Chain E: G.51
- Ligands: CLA.4, CLA.5, CLA.9, CLA.31, CLA.42
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:W.49, A:H.52, A:A.53, A:F.399, A:F.399, A:L.595, A:A.729, A:L.732, A:I.736
- Hydrogen bonds: A:N.54, A:N.54, A:R.571, A:S.719
- Salt bridges: A:R.571, A:R.571
LHG.52: 18 residues within 4Å:- Chain A: H.328, K.329, G.330, P.331, F.332, T.333, G.336, H.337
- Ligands: CLA.25, CLA.27, CLA.32, CLA.33, CLA.38, CLA.39, CLA.40, CLA.43, BCR.47, LHG.54
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.330, A:F.332, A:T.333
LHG.54: 3 residues within 4Å:- Ligands: CLA.24, CLA.43, LHG.52
No protein-ligand interaction detected (PLIP)LHG.108: 15 residues within 4Å:- Chain B: H.308, K.309, G.310, P.311, L.312, T.313, G.316, H.317, V.405
- Ligands: CLA.81, CLA.83, CLA.88, CLA.89, CLA.96, CLA.99
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.308, B:L.312, B:T.313
LHG.119: 4 residues within 4Å:- Chain B: W.460
- Chain F: D.24, D.25
- Ligands: CLA.117
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain B- Hydrogen bonds: F:D.24, F:D.24, F:D.25
- Hydrophobic interactions: B:W.460
- 4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.51: 13 residues within 4Å:- Chain A: H.450, F.471, I.476, Q.477, L.478, Q.479, I.481
- Chain J: L.67, L.68, R.72
- Ligands: CLA.34, CLA.35, CLA.39
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain J- Hydrophobic interactions: A:F.471, A:L.478, A:Q.479, A:Q.479, A:I.481
- Hydrogen bonds: A:Q.477, J:L.67
LMG.53: 6 residues within 4Å:- Chain A: I.481, F.482, Q.484, W.485, Q.487, H.488
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:I.481, A:F.482, A:W.485, A:W.485, A:W.485
- Hydrogen bonds: A:Q.487
LMG.107: 17 residues within 4Å:- Chain B: W.22, Y.23, A.26, T.27, S.553, W.570, V.700, Q.701, L.704, V.712
- Ligands: CLA.62, CLA.64, CLA.67, CLA.85, CLA.87, CLA.98, PQN.100
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:Y.23, B:A.26, B:Q.701, B:Q.701, B:V.712
- Hydrogen bonds: B:S.553
LMG.109: 4 residues within 4Å:- Chain B: G.228, W.230, G.231
- Ligands: CLA.74
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:W.230, B:W.230
- 1 x 45D: beta,beta-carotene-4,4'-dione(Non-covalent)
45D.57: 14 residues within 4Å:- Chain A: A.674, F.677, V.678, V.737, W.740
- Ligands: CLA.2, CLA.3, CLA.4, CLA.9, CLA.29, CLA.31, CLA.42, CLA.90, BCR.115
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.677, A:V.678, A:V.737, A:V.737
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.59: 11 residues within 4Å:- Chain A: C.574, G.576, P.577, C.583, R.724
- Chain B: C.556, G.558, P.559, C.565, W.664, R.703
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A,- Metal complexes: B:C.556, B:C.565, A:C.574, A:C.583
SF4.112: 12 residues within 4Å:- Chain C: C.21, P.22, V.25, L.26, C.48, V.49, G.50, C.51, K.52, R.53, C.54, V.67
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.21, C:C.48, C:C.51, C:C.54
SF4.113: 10 residues within 4Å:- Chain C: C.11, I.12, G.13, C.14, T.15, C.17, C.58, P.59, T.60, I.65
4 PLIP interactions:4 interactions with chain C,- Metal complexes: C:C.11, C:C.14, C:C.17, C:C.58
- 2 x ECH: beta,beta-caroten-4-one(Non-covalent)
ECH.103: 11 residues within 4Å:- Chain B: T.61, L.65, W.123, F.124, M.129, G.138, F.141, L.213
- Ligands: CLA.72, CLA.73, CLA.86
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:T.61, B:L.65, B:F.124, B:F.141, B:L.213
ECH.134: 10 residues within 4Å:- Chain B: I.56, L.59, L.150
- Chain K: L.12, L.16, A.19, A.22, S.26
- Ligands: CLA.62, CLA.65
6 PLIP interactions:3 interactions with chain K, 3 interactions with chain B- Hydrophobic interactions: K:L.16, K:A.19, K:A.22, B:I.56, B:I.56, B:L.150
- 1 x EQ3: (3'R)-3'-hydroxy-beta,beta-caroten-4-one(Non-covalent)
EQ3.110: 14 residues within 4Å:- Chain B: T.682, L.684
- Chain G: W.20
- Chain J: W.65, A.87, L.88
- Ligands: CLA.33, CLA.34, CLA.35, CLA.56, CLA.68, CLA.97, BCR.121, CLA.131
6 PLIP interactions:1 interactions with chain B, 3 interactions with chain J, 2 interactions with chain G- Hydrophobic interactions: B:T.682, J:W.65, J:A.87, J:L.88, G:W.20, G:W.20
- 2 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)
ZEX.111: 20 residues within 4Å:- Chain B: F.426, L.427, H.430, L.434, I.453, F.514, H.518
- Chain F: L.75, D.86, F.87, P.90
- Chain H: L.36, L.37, F.38, H.39, P.40
- Ligands: CLA.91, CLA.95, BCR.115, CLA.124
11 PLIP interactions:6 interactions with chain B, 3 interactions with chain F, 2 interactions with chain H- Hydrophobic interactions: B:F.426, B:H.430, B:L.434, B:I.453, B:F.514, F:L.75, F:F.87, F:P.90, H:L.36, H:H.39
- Hydrogen bonds: B:F.426
ZEX.118: 15 residues within 4Å:- Chain A: L.707
- Chain B: F.457
- Chain F: V.77, D.78, G.79, A.98, G.99, G.102, W.103, W.140, A.144
- Ligands: CLA.89, CLA.90, CLA.95, CLA.117
7 PLIP interactions:5 interactions with chain F, 1 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: F:V.77, F:A.144, B:F.457, A:L.707
- Hydrogen bonds: F:V.77, F:A.98, F:W.103
- 1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.120: 10 residues within 4Å:- Chain F: V.124, I.125, N.126, V.127, P.128
- Chain H: K.5, S.6, L.8, S.9, M.14
8 PLIP interactions:5 interactions with chain H, 3 interactions with chain F- Hydrophobic interactions: H:K.5, H:L.8, H:L.8, F:V.127
- Hydrogen bonds: H:K.5, H:S.9, F:I.125, F:V.127
- 1 x FE2: FE (II) ION(Non-covalent)
FE2.135: 4 residues within 4Å:- Chain L: H.215, H.272
- Chain M: H.220, H.274
4 PLIP interactions:2 interactions with chain M, 2 interactions with chain L- Metal complexes: M:H.220, M:H.274, L:H.215, L:H.272
- 2 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.138: 22 residues within 4Å:- Chain L: L.41, T.45, F.48, V.115, F.119, I.123, Y.126, Q.130, A.146, Y.147, A.149, P.150, L.174, G.175, I.283
- Chain M: L.211, L.215, I.219, W.259, F.263
- Ligands: CLA.136, CLA.141
16 PLIP interactions:13 interactions with chain L, 3 interactions with chain M- Hydrophobic interactions: L:L.41, L:L.41, L:F.48, L:V.115, L:F.119, L:F.119, L:A.146, L:A.149, L:L.174, L:I.283, M:L.211, M:L.211, M:L.215
- Hydrogen bonds: L:Y.126, L:Q.130, L:Y.147
PHO.142: 23 residues within 4Å:- Chain L: F.206, S.209, L.210, A.213, M.214
- Chain M: L.43, A.47, L.51, W.54, G.124, G.127, L.128, F.131, N.148, A.151, F.152, P.155, G.180, V.181, V.282, L.285
- Ligands: CLA.137, CLA.143
17 PLIP interactions:4 interactions with chain L, 13 interactions with chain M- Hydrophobic interactions: L:F.206, L:L.210, L:L.210, L:A.213, M:A.47, M:L.51, M:W.54, M:W.54, M:F.131, M:F.131, M:A.151, M:F.152, M:F.152, M:F.152, M:V.181, M:V.282
- Hydrogen bonds: M:N.148
- 1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.145: 10 residues within 4Å:- Chain N: Y.19, I.22, H.23, T.26, I.27
- Chain O: R.18, W.19, V.22, H.23, A.26
10 PLIP interactions:4 interactions with chain O, 6 interactions with chain N,- Hydrophobic interactions: O:V.22, O:A.26, N:Y.19, N:I.22, N:T.26, N:I.27, N:I.27
- pi-Stacking: O:W.19, N:H.23
- Metal complexes: O:H.23
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhao, Z. et al., The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis. Nat Commun (2023)
- Release Date
- 2023-08-16
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit III: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit IX: H
Photosystem I reaction center subunit PsaK 1: I
Photosystem I reaction center subunit XI: J
Photosystem I reaction center subunit XII: K
Photosystem II protein D1 2: L
Photosystem II D2 protein: M
Cytochrome b559 subunit alpha: N
Cytochrome b559 subunit beta: O
Photosystem II reaction center protein I: P
Photosystem II assembly lipoprotein Ycf48: Q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
aB
bC
cD
dE
eF
fG
iH
jI
kJ
lK
mL
AM
DN
EO
FP
IQ
S - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x CL0: CHLOROPHYLL A ISOMER(Covalent)
- 101 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
- 2 x PQN: PHYLLOQUINONE(Non-covalent)
- 18 x BCR: BETA-CAROTENE(Non-covalent)
- 5 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Non-functional Binders)
- 4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 1 x 45D: beta,beta-carotene-4,4'-dione(Non-covalent)
- 3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x ECH: beta,beta-caroten-4-one(Non-covalent)
- 1 x EQ3: (3'R)-3'-hydroxy-beta,beta-caroten-4-one(Non-covalent)
- 2 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)
- 1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 1 x FE2: FE (II) ION(Non-covalent)
- 2 x PHO: PHEOPHYTIN A(Non-covalent)
- 1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhao, Z. et al., The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis. Nat Commun (2023)
- Release Date
- 2023-08-16
- Peptides
- Photosystem I P700 chlorophyll a apoprotein A1: A
Photosystem I P700 chlorophyll a apoprotein A2: B
Photosystem I iron-sulfur center: C
Photosystem I reaction center subunit II: D
Photosystem I reaction center subunit IV: E
Photosystem I reaction center subunit III: F
Photosystem I reaction center subunit VIII: G
Photosystem I reaction center subunit IX: H
Photosystem I reaction center subunit PsaK 1: I
Photosystem I reaction center subunit XI: J
Photosystem I reaction center subunit XII: K
Photosystem II protein D1 2: L
Photosystem II D2 protein: M
Cytochrome b559 subunit alpha: N
Cytochrome b559 subunit beta: O
Photosystem II reaction center protein I: P
Photosystem II assembly lipoprotein Ycf48: Q - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
aB
bC
cD
dE
eF
fG
iH
jI
kJ
lK
mL
AM
DN
EO
FP
IQ
S - Membrane
-
We predict this structure to be a membrane protein.