- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 1 x H2S: HYDROSULFURIC ACID(Non-covalent)
- 1 x W: TUNGSTEN ION(Non-covalent)
- 2 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
MGD.4: 36 residues within 4Å:- Chain A: C.53, K.90, U.192, G.226, S.227, N.228, E.231, N.232, H.233, D.254, P.255, R.256, I.270, S.272, G.273, D.275, A.404, M.405, G.406, W.407, H.410, G.442, E.443, T.881, Y.883, R.884, V.885, T.886, H.888, W.889, Q.890, H.965, K.996
- Ligands: H2S.2, W.3, MGD.5
26 PLIP interactions:26 interactions with chain A- Hydrogen bonds: A:G.226, A:N.228, A:N.228, A:E.231, A:N.232, A:N.232, A:R.256, A:R.256, A:G.273, A:M.405, A:G.406, A:W.407, A:T.881, A:R.884, A:R.884, A:H.888, A:Q.890, A:Q.890
- Water bridges: A:K.90, A:K.90, A:S.227, A:D.275
- Salt bridges: A:D.275, A:R.884, A:R.884, A:K.996
MGD.5: 33 residues within 4Å:- Chain A: A.164, Q.188, I.191, U.192, M.405, Q.409, E.443, W.551, G.552, M.553, N.554, G.558, V.578, N.579, L.580, C.608, C.609, K.614, D.641, T.882, R.884, Q.890, T.891, L.893, M.894, W.964, N.979, T.982, T.995, K.996
- Ligands: H2S.2, W.3, MGD.4
25 PLIP interactions:25 interactions with chain A- Hydrogen bonds: A:Q.188, A:Q.409, A:N.554, A:N.554, A:G.558, A:V.578, A:N.579, A:K.614, A:K.614, A:T.882, A:T.882, A:R.884, A:R.884, A:T.891, A:N.979, A:N.979, A:K.996
- Water bridges: A:G.558, A:G.558, A:G.892, A:G.892
- Salt bridges: A:D.641
- pi-Stacking: A:W.964, A:W.964
- pi-Cation interactions: A:W.964
- 4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
SF4.6: 12 residues within 4Å:- Chain A: C.50, Y.52, C.53, V.55, G.56, C.57, L.87, C.88, K.90, G.91, P.234, I.235
4 PLIP interactions:4 interactions with chain A,- Metal complexes: A:C.50, A:C.53, A:C.57, A:C.88
SF4.8: 12 residues within 4Å:- Chain B: C.12, T.13, A.14, C.15, R.16, C.18, P.71, C.157, P.158, T.159, T.161, M.162
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.12, B:C.15, B:C.18, B:C.157
SF4.9: 13 residues within 4Å:- Chain B: C.74, R.75, H.76, C.77, P.80, P.81, C.82, V.103, C.121, P.122, Y.123, P.126, K.137
4 PLIP interactions:4 interactions with chain B,- Metal complexes: B:C.74, B:C.77, B:C.82, B:C.121
SF4.10: 12 residues within 4Å:- Chain B: F.5, C.22, K.26, K.51, Q.73, C.138, D.139, M.140, C.141, P.151, A.152, C.153
5 PLIP interactions:5 interactions with chain B,- Salt bridges: B:D.139
- Metal complexes: B:C.22, B:C.138, B:C.141, B:C.153
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Oliveira, A.R. et al., An allosteric redox switch involved in oxygen protection in a CO 2 reductase. Nat.Chem.Biol. (2024)
- Release Date
- 2023-09-27
- Peptides
- Formate dehydrogenase, alpha subunit, selenocysteine-containing: A
Formate dehydrogenase, beta subunit, putative: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 1 x H2S: HYDROSULFURIC ACID(Non-covalent)
- 1 x W: TUNGSTEN ION(Non-covalent)
- 2 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Oliveira, A.R. et al., An allosteric redox switch involved in oxygen protection in a CO 2 reductase. Nat.Chem.Biol. (2024)
- Release Date
- 2023-09-27
- Peptides
- Formate dehydrogenase, alpha subunit, selenocysteine-containing: A
Formate dehydrogenase, beta subunit, putative: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D