SMTL ID : 8fh4.3 (3 other biounits)

Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with 3-[6-chloro-4-(9-methyl-1-oxa-4,9-diazaspiro[5.5]undec-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x XXF: (3P)-3-[6-chloro-4-(9-methyl-1-oxa-4,9-diazaspiro[5.5]undecan-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile(Non-covalent)

XXF.1: 18 residues within 4Å: Chain A: L.47, G.48, G.50, V.55, A.68, K.70, V.99, M.115, E.116, F.117, C.118, S.122, Q.124, D.125, A.165, N.166, L.168, D.179 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.55, A:L.168, A:L.168, A:D.179 Hydrogen bonds: A:E.116, A:C.118, A:S.122 Water bridges: A:G.49, A:T.51, A:D.179 Salt bridges: A:D.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gallego, R.A. et al., Design and Synthesis of Functionally Active 5-Amino-6-Aryl Pyrrolopyrimidine Inhibitors of Hematopoietic Progenitor Kinase 1. J.Med.Chem. (2023)

Release Date

2023-04-05

Peptides

Mitogen-activated protein kinase kinase kinase kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Mitogen-activated protein kinase kinase kinase kinase 1

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