SMTL ID : 8fko.2 (2 other biounits)

Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with 3-{4-[(2S,5R)-5-Amino-2-methylpiperidin-1-yl]-6-chloro-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x Y3O: (3P)-3-{4-[(2S,5R)-5-amino-2-methylpiperidin-1-yl]-6-chloro-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile(Non-covalent)

Y3O.1: 16 residues within 4Å: Chain A: L.47, G.49, V.55, A.68, K.70, V.99, M.115, E.116, F.117, C.118, G.121, D.125, N.166, L.168, A.178, D.179 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.47, A:V.55, A:L.168, A:L.168, A:A.178, A:D.179 Hydrogen bonds: A:E.116, A:C.118, A:D.125 Water bridges: A:S.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gallego, R.A. et al., Design and Synthesis of Functionally Active 5-Amino-6-Aryl Pyrrolopyrimidine Inhibitors of Hematopoietic Progenitor Kinase 1. J.Med.Chem. (2023)

Release Date

2023-04-05

Peptides

Mitogen-activated protein kinase kinase kinase kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

Mitogen-activated protein kinase kinase kinase kinase 1

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