SMTL ID : 8fpe.1

Crystal structure of pregnane X receptor ligand binding domain complexed with T0901317 analog T0-BP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x Y5B: N-[([1,1'-biphenyl]-4-yl)methyl]-N-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]benzenesulfonamide(Non-covalent)

Y5B.1: 17 residues within 4Å: Chain A: C.89, S.90, L.91, V.93, L.122, M.125, M.128, S.129, Q.167, F.170, W.181, L.190, E.203, L.206, H.289, L.293, F.302 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:S.90, A:V.93, A:M.128, A:L.190, A:E.203, A:L.206, A:L.206 Hydrogen bonds: A:Q.167 pi-Stacking: A:F.170 Halogen bonds: A:S.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, W. et al., Structure-guided approach to modulate small molecule binding to a promiscuous ligand-activated protein. Proc.Natl.Acad.Sci.USA (2023)

Release Date

2023-03-15

Peptides

Nuclear receptor subfamily 1 group I member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor subfamily 1 group I member 2

Related Entries With Identical Sequence