SMTL ID : 8h5z.2 (1 other biounit)

Crystal structure of RadD/ATP analogue complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.1: 14 residues within 4Å: Chain A: T.4, L.5, R.6, Q.9, P.32, T.33, G.34, A.35, G.36, K.37, S.38, L.39, K.68, R.343 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:T.4, A:R.6, A:R.6, A:Q.9, A:A.35, A:G.36, A:K.37, A:S.38, A:S.38, A:R.343 Salt bridges: A:K.37, A:K.68, A:K.68, A:R.343 pi-Cation interactions: A:R.6, A:R.6

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.384, C.387, C.411, C.425 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.384, A:C.387, A:C.411, A:C.425

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tian, L.F. et al., Biochemical and Structural Analyses Shed Light on the Mechanisms of RadD DNA Binding and Its ATPase from Escherichia coli. Int J Mol Sci (2023)

Release Date

2023-10-18

Peptides

Putative DNA repair helicase RadD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative DNA repair helicase RadD

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