SMTL ID : 8hfi.1

Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant desipramine in an inward-open state at resolution of 2.5 angstrom.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x DSM: 3-(10,11-DIHYDRO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N-METHYLPROPAN-1-AMINE(Non-covalent)

DSM.1: 12 residues within 4Å: Chain A: D.75, A.145, V.148, G.149, Y.152, F.317, S.318, G.320, F.323, V.325, S.419, G.423 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.148, A:F.323, A:F.323, A:V.325, A:V.325 Hydrogen bonds: A:D.75

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: N.78, F.82, Y.98, Q.314, S.318, S.354 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, J. et al., Molecular basis of human noradrenaline transporter reuptake and inhibition. Nature (2024)

Release Date

2024-05-15

Peptides

Sodium-dependent noradrenaline transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Sodium-dependent noradrenaline transporter

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