SMTL ID : 8hq1.1 (2 other biounits)

Crystal Structure Of Human Lgi1-Adam22 Complex In Space Group C2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.17 Å

Oligo State

hetero-1-1-mer

Ligands

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: S.285, N.287 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.285, A:N.287 NAG.2: 1 residues within 4Å: Chain A: N.443 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.443 NAG.3: 4 residues within 4Å: Chain A: S.391, L.393, N.402, S.404 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.393 Hydrogen bonds: A:S.391, A:N.402, A:S.404 NAG.7: 1 residues within 4Å: Chain B: N.391 No protein-ligand interaction detected (PLIP) NAG.8: 1 residues within 4Å: Chain B: N.161 No protein-ligand interaction detected (PLIP) NAG.9: 6 residues within 4Å: Chain B: T.226, K.228, N.243, Y.244, D.245, N.246 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.226, B:T.226, B:K.228

4 x CA: CALCIUM ION(Non-covalent)

CA.4: 4 residues within 4Å: Chain A: E.10, D.93, C.201, N.204 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.10, A:D.93, A:D.93, A:C.201 CA.5: 7 residues within 4Å: Chain A: E.214, C.215, N.217, F.219, E.221, E.224, D.227 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.214, A:E.221, A:E.224, A:E.224, A:D.227 CA.6: 5 residues within 4Å: Chain A: D.279, I.280, E.282, N.294, I.295 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.279, A:I.280, A:E.282, A:I.295 CA.10: 6 residues within 4Å: Chain B: D.303, E.305, D.350, V.351, E.352, K.405 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.303, B:D.350, B:V.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, H.L. et al., Structure Of Human Lgi1-Adam22 Complex In Space Group C2. To Be Published

Release Date

2023-12-13

Peptides

Disintegrin and metalloproteinase domain-containing protein 22: A
Leucine-rich glioma-inactivated protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Disintegrin and metalloproteinase domain-containing protein 22

Leucine-rich glioma-inactivated protein 1

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