SMTL ID : 8hq2.1 (1 other biounit)

Crystal structure of human ADAM22 in complex with human LGI1 mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.93 Å

Oligo State

hetero-1-1-mer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: Y.8, E.10, D.93, C.201, N.204 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.93, A:D.93, A:C.201 CA.2: 6 residues within 4Å: Chain A: E.214, N.217, F.219, E.221, E.224, D.227 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.214, A:F.219, A:E.221, A:E.224, A:D.227 CA.3: 5 residues within 4Å: Chain A: D.279, I.280, E.282, N.294, I.295 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.279, A:I.280, A:E.282, A:E.282, A:I.295 CA.7: 7 residues within 4Å: Chain B: D.303, I.304, E.305, D.350, V.351, E.352, K.405 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.305

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 3 residues within 4Å: Chain A: I.389, S.391, N.402 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.391, A:N.402 NAG.5: 1 residues within 4Å: Chain A: N.287 No protein-ligand interaction detected (PLIP) NAG.6: 1 residues within 4Å: Chain A: N.443 No protein-ligand interaction detected (PLIP) NAG.8: 6 residues within 4Å: Chain B: Q.223, T.226, K.228, I.230, N.243, N.246 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.223, B:N.243 NAG.9: 1 residues within 4Å: Chain B: N.391 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.391 Water bridges: B:N.383 NAG.10: 1 residues within 4Å: Chain B: N.161 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, H. et al., Crystal structure of human ADAM22 in complex with human LGI1 mutant. To Be Published

Release Date

2023-12-13

Peptides

Disintegrin and metalloproteinase domain-containing protein 22: A
Leucine-rich glioma-inactivated protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Disintegrin and metalloproteinase domain-containing protein 22

Leucine-rich glioma-inactivated protein 1

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