SMTL ID : 8ii2.1

Crystal structure of V30M-TTR in complex with BBM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x R75: [3,5-bis(bromanyl)-4-oxidanyl-phenyl]-(2-ethyl-1-benzofuran-3-yl)methanone(Non-covalent)

R75.1: 8 residues within 4Å: Chain A: K.47, L.49, A.140, A.141, L.142, S.149, T.150, T.151 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.49, A:L.142, A:L.142 Hydrogen bonds: A:K.47 R75.3: 8 residues within 4Å: Chain B: K.47, L.49, A.140, A.141, L.142, S.149, T.150, T.151 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:L.49, B:L.142, B:L.142 Hydrogen bonds: B:K.47

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 2 residues within 4Å: Chain B: F.96, D.131 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:F.96, B:D.131, H2O.3, H2O.4, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mizuguchi, M. et al., Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis. Bioorg.Med.Chem. (2023)

Release Date

2023-06-28

Peptides

Transthyretin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transthyretin

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