SMTL ID : 8ii3.1

Crystal structure of V30M-TTR in complex with 6-hydroxy BID

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x PKK: [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-(2-ethyl-6-oxidanyl-1-benzofuran-3-yl)methanone(Non-covalent)

PKK.1: 6 residues within 4Å: Chain A: K.47, L.49, A.140, A.141, L.142, S.149 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.49, A:L.49, A:A.140, A:L.142 Hydrogen bonds: A:K.47, A:K.47, A:S.149 Water bridges: A:S.149 PKK.2: 5 residues within 4Å: Chain B: K.47, A.140, L.142, S.149, T.151 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:L.142 Hydrogen bonds: B:K.47, B:S.149, B:S.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mizuguchi, M. et al., Benziodarone and 6-hydroxybenziodarone are potent and selective inhibitors of transthyretin amyloidogenesis. Bioorg.Med.Chem. (2023)

Release Date

2023-06-28

Peptides

Transthyretin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transthyretin

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