SMTL ID : 8is8.1

CrtMLIKE with two GsPP molecules

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

4 x GST: GERANYL S-THIOLODIPHOSPHATE(Non-covalent)

GST.1: 13 residues within 4Å: Chain A: Y.41, C.44, R.45, D.48, D.52, V.133, L.137, Q.161, N.164 Ligands: GST.2, MG.3, MG.4, MG.5 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:Y.41, A:Y.41, A:R.45, A:V.133, A:L.137 Hydrogen bonds: A:R.45, A:R.45, A:Q.161, A:N.164 Water bridges: A:Q.107, A:Q.107, A:Y.125, A:Y.125, A:Y.125, A:Y.125, A:Y.125, A:N.164, A:E.171 GST.2: 15 residues within 4Å: Chain A: H.18, S.19, F.22, F.26, Y.41, A.130, G.134, L.137, L.141, L.156, M.160, N.164, V.237, Y.244 Ligands: GST.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.22, A:F.26, A:L.137, A:L.141, A:L.156, A:V.237 Hydrogen bonds: A:H.18, A:S.19, A:Y.41, A:N.164, A:Y.244 GST.6: 13 residues within 4Å: Chain B: Y.41, C.44, R.45, D.48, D.52, V.133, L.137, Q.161, N.164 Ligands: GST.7, MG.8, MG.9, MG.10 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:Y.41, B:Y.41, B:R.45, B:V.133, B:L.137 Hydrogen bonds: B:R.45, B:R.45, B:Q.161, B:N.164 Water bridges: B:Q.107, B:Q.107, B:Y.125, B:Y.125, B:N.164, B:D.168, B:D.168, B:E.171, B:Y.179 GST.7: 15 residues within 4Å: Chain B: H.18, S.19, F.22, F.26, Y.41, A.130, G.134, L.137, L.141, L.156, M.160, N.164, V.237, Y.244 Ligands: GST.6 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.22, B:F.26, B:L.137, B:L.141, B:L.156, B:V.237 Hydrogen bonds: B:H.18, B:S.19, B:N.164

6 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: N.164, D.168 Ligands: GST.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.168, H2O.1, H2O.1, H2O.2 MG.4: 4 residues within 4Å: Chain A: D.48, D.52 Ligands: GST.1, MG.5 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.48, A:D.52, H2O.1, H2O.2, H2O.3 MG.5: 4 residues within 4Å: Chain A: D.48, D.52 Ligands: GST.1, MG.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.48, A:D.52, H2O.1 MG.8: 3 residues within 4Å: Chain B: N.164, D.168 Ligands: GST.6 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.168, H2O.6, H2O.6, H2O.7 MG.9: 4 residues within 4Å: Chain B: D.48, D.52 Ligands: GST.6, MG.10 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.48, B:D.52, H2O.6, H2O.7, H2O.8 MG.10: 4 residues within 4Å: Chain B: D.48, D.52 Ligands: GST.6, MG.9 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.48, B:D.52, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, J.Y., CrtMLIKE with two GsPP molecules. To Be Published

Release Date

2024-06-26

Peptides

CrtM: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CrtM

Related Entries With Identical Sequence