SMTL ID : 8is9.1

CrtMLIKE with one FsPP molecule

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

homo-dimer

Ligands

2 x FPS: S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE(Non-covalent)

FPS.1: 19 residues within 4Å: Chain A: H.18, F.22, F.26, R.45, D.48, D.52, A.130, V.133, G.134, L.141, G.157, M.160, Q.161, N.164, R.167, Y.244 Ligands: MG.2, MG.3, MG.4 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:F.22, A:F.26, A:V.133, A:V.133, A:N.164 Hydrogen bonds: A:R.45, A:Q.161, A:Q.161, A:N.164, A:R.167 Water bridges: A:Q.107, A:Y.125, A:Y.125, A:Y.125, A:Y.125, A:N.164, A:N.164, A:N.164, A:Y.179, A:Y.179, A:Y.179 FPS.5: 19 residues within 4Å: Chain B: H.18, F.22, F.26, R.45, D.48, D.52, A.130, V.133, G.134, L.141, G.157, M.160, Q.161, N.164, R.167, Y.244 Ligands: MG.6, MG.7, MG.8 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:F.22, B:F.26, B:V.133, B:V.133, B:N.164 Hydrogen bonds: B:R.45, B:Q.161, B:Q.161, B:N.164, B:N.164, B:R.167 Water bridges: B:Y.125, B:D.168, B:D.168, B:D.168, B:R.177

6 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.164, D.168 Ligands: FPS.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.168, H2O.3, H2O.3, H2O.4 MG.3: 5 residues within 4Å: Chain A: R.45, D.48, D.52 Ligands: FPS.1, MG.4 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.48, A:D.52, H2O.3, H2O.6 MG.4: 5 residues within 4Å: Chain A: D.48, D.52, D.110 Ligands: FPS.1, MG.3 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.48, A:D.52, H2O.2, H2O.3, H2O.8 MG.6: 3 residues within 4Å: Chain B: N.164, D.168 Ligands: FPS.5 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.168, H2O.17, H2O.17, H2O.18 MG.7: 5 residues within 4Å: Chain B: R.45, D.48, D.52 Ligands: FPS.5, MG.8 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.48, B:D.52, H2O.17, H2O.19 MG.8: 5 residues within 4Å: Chain B: D.48, D.52, D.110 Ligands: FPS.5, MG.7 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.48, B:D.52, H2O.16, H2O.16, H2O.21

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, J.Y., CrtMLIKE with one FsPP molecule. To Be Published

Release Date

2024-06-26

Peptides

CrtM: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CrtM

Related Entries With Identical Sequence