SMTL ID : 8j5p.1

Cryo-EM structure of native RC-LH complex from Roseiflexus castenholzii at 2,000lux

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-15-15-1-1-1-1-1-1-mer

Ligands

48 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)(Covalent)

BCL.1: 18 residues within 4Å: Chain A: G.36, L.37, A.40, H.44, C.47, W.53 Chain J: M.22, A.23, I.26, H.27, F.36 Ligands: KGD.3, BCL.19, BCL.20, KGD.22, BCL.24, KGD.26, BCL.27 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain J, Hydrophobic interactions: A:A.40, A:W.53, A:W.53, A:W.53, J:I.26, J:F.36 Metal complexes: A:H.44 BCL.2: 14 residues within 4Å: Chain A: W.14, L.17, F.18, H.26, Y.34 Chain I: I.28, K.31, T.32 Chain J: F.8, S.11, V.12, S.15 Ligands: KGD.15, KGD.22 11 PLIP interactions: 7 interactions with chain A, 2 interactions with chain J, 2 interactions with chain I, Hydrophobic interactions: A:W.14, A:W.14, A:L.17, A:F.18, A:F.18, J:F.8, J:V.12, I:K.31 Hydrogen bonds: A:Y.34 Metal complexes: A:H.26 Salt bridges: I:K.31 BCL.4: 18 residues within 4Å: Chain B: T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain C: G.36, I.39, A.40, H.44 Chain D: S.11 Chain E: I.54 Ligands: BCL.5, KGD.7, KGD.9, BCL.10, KGD.30 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain E, Hydrophobic interactions: B:V.30, E:I.54 Metal complexes: B:H.27 BCL.5: 22 residues within 4Å: Chain B: G.19, M.22, A.23, I.26, H.27, F.36 Chain C: I.33, G.36, L.37, A.40, H.44, C.47, W.53 Chain M: I.38, W.41, I.42, I.46 Ligands: BCL.4, KGD.7, KGD.9, BCL.10, KGD.30 12 PLIP interactions: 6 interactions with chain C, 4 interactions with chain M, 2 interactions with chain B, Hydrophobic interactions: C:L.37, C:A.40, C:W.53, C:W.53, C:W.53, M:I.38, M:W.41, M:I.42, M:I.46, B:I.26, B:F.36 Metal complexes: C:H.44 BCL.6: 13 residues within 4Å: Chain B: E.7, F.8, S.11, V.12, S.15 Chain C: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Chain M: F.20 7 PLIP interactions: 1 interactions with chain B, 6 interactions with chain C, Hydrophobic interactions: B:V.12, C:W.14, C:W.14, C:L.17, C:F.18, C:F.18 Metal complexes: C:H.26 BCL.8: 21 residues within 4Å: Chain D: T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain E: G.36, I.39, A.40, A.43, H.44 Chain F: F.6, S.11, I.26 Chain G: I.54 Ligands: KGD.9, BCL.10, KGD.12, KGD.14, BCL.16 8 PLIP interactions: 2 interactions with chain F, 1 interactions with chain E, 4 interactions with chain D, 1 interactions with chain G, Hydrophobic interactions: F:F.6, F:I.26, E:A.43, D:V.30, D:W.38, D:W.38, G:I.54 Metal complexes: D:H.27 BCL.10: 20 residues within 4Å: Chain D: G.19, M.22, A.23, I.26, H.27 Chain E: I.33, G.36, L.37, A.40, H.44, C.47, W.53 Ligands: BCL.4, BCL.5, KGD.7, BCL.8, KGD.9, KGD.12, KGD.14, BCL.16 7 PLIP interactions: 1 interactions with chain D, 6 interactions with chain E, Hydrophobic interactions: D:I.26, E:A.40, E:W.53, E:W.53, E:W.53, E:W.53 Metal complexes: E:H.44 BCL.11: 13 residues within 4Å: Chain C: I.28, K.31, T.32, G.35 Chain D: F.8, S.11, S.15 Chain E: W.14, F.18, H.26, Y.34 Ligands: KGD.7, KGD.30 10 PLIP interactions: 5 interactions with chain E, 1 interactions with chain D, 4 interactions with chain C, Hydrophobic interactions: E:W.14, E:W.14, E:F.18, E:F.18, D:F.8, C:I.28, C:K.31, C:K.31 Metal complexes: E:H.26 Salt bridges: C:K.31 BCL.13: 21 residues within 4Å: Chain F: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain G: G.36, I.39, A.40, A.43, H.44 Chain H: F.6, S.11 Chain I: I.54 Ligands: KGD.14, KGD.15, BCL.16, KGD.18, BCL.20 7 PLIP interactions: 3 interactions with chain F, 1 interactions with chain G, 2 interactions with chain H, 1 interactions with chain I, Hydrophobic interactions: F:V.13, F:V.30, G:A.43, H:F.6, H:F.6, I:I.54 Metal complexes: F:H.27 BCL.16: 20 residues within 4Å: Chain F: G.19, M.22, A.23, I.26, H.27, F.36 Chain G: I.33, G.36, L.37, A.40, H.44, C.47, W.53 Ligands: BCL.8, BCL.10, KGD.12, BCL.13, KGD.15, KGD.18, BCL.20 7 PLIP interactions: 5 interactions with chain G, 2 interactions with chain F, Hydrophobic interactions: G:W.53, G:W.53, G:W.53, G:W.53, F:I.26, F:F.36 Metal complexes: G:H.44 BCL.17: 17 residues within 4Å: Chain E: I.28, K.31, T.32, G.35 Chain F: R.4, F.8, S.11, V.12, S.15 Chain G: W.14, L.17, F.18, H.26, V.30, Y.34 Ligands: KGD.9, KGD.12 11 PLIP interactions: 6 interactions with chain G, 3 interactions with chain E, 2 interactions with chain F, Hydrophobic interactions: G:W.14, G:W.14, G:L.17, G:F.18, G:V.30, E:I.28, E:K.31, F:V.12 Metal complexes: G:H.26 Salt bridges: E:K.31 Hydrogen bonds: F:R.4 BCL.19: 20 residues within 4Å: Chain H: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain I: G.36, I.39, A.40, A.43, H.44 Chain J: F.6, S.11 Ligands: BCL.1, KGD.15, BCL.20, KGD.22, KGD.23 8 PLIP interactions: 1 interactions with chain J, 5 interactions with chain H, 2 interactions with chain I, Hydrophobic interactions: J:F.6, H:V.13, H:T.16, H:V.30, H:W.38, I:A.43 Metal complexes: H:H.27 Hydrogen bonds: I:H.44 BCL.20: 19 residues within 4Å: Chain H: M.22, A.23, I.26, H.27, F.36 Chain I: I.33, G.36, L.37, H.44, C.47, W.53 Ligands: BCL.1, BCL.13, KGD.15, BCL.16, KGD.18, BCL.19, KGD.22, KGD.23 6 PLIP interactions: 4 interactions with chain I, 2 interactions with chain H, Hydrophobic interactions: I:W.53, I:W.53, I:W.53, H:I.26, H:F.36 Metal complexes: I:H.44 BCL.21: 14 residues within 4Å: Chain G: I.28, K.31, T.32 Chain H: S.11, S.15 Chain I: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Ligands: KGD.14, KGD.18 10 PLIP interactions: 8 interactions with chain I, 2 interactions with chain G, Hydrophobic interactions: I:W.14, I:W.14, I:L.17, I:F.18, I:V.30, I:I.33, G:K.31 Hydrogen bonds: I:Y.34 Metal complexes: I:H.26 Salt bridges: G:K.31 BCL.24: 20 residues within 4Å: Chain A: G.36, I.39, A.40, A.43, H.44 Chain J: V.13, T.16, G.19, L.20, A.23, H.27, W.38 Chain K: F.6, S.11, I.26 Ligands: BCL.1, KGD.3, KGD.23, KGD.26, BCL.27 7 PLIP interactions: 4 interactions with chain J, 2 interactions with chain K, 1 interactions with chain A, Hydrophobic interactions: J:V.13, J:W.38, J:W.38, K:F.6, K:I.26, A:A.43 Metal complexes: J:H.27 BCL.25: 19 residues within 4Å: Chain K: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain L: G.36, I.39, A.40, A.43, H.44 Chain N: S.11 Ligands: KGD.26, BCL.27, KGD.29, BCL.37, KGD.39 6 PLIP interactions: 5 interactions with chain K, 1 interactions with chain L, Hydrophobic interactions: K:V.13, K:L.20, K:V.30, K:W.38, L:A.43 Metal complexes: K:H.27 BCL.27: 19 residues within 4Å: Chain K: G.19, M.22, A.23, I.26, H.27, F.36 Chain L: G.36, A.40, H.44, C.47, W.53 Ligands: BCL.1, KGD.3, BCL.24, BCL.25, KGD.26, KGD.29, BCL.37, KGD.39 8 PLIP interactions: 6 interactions with chain L, 2 interactions with chain K, Hydrophobic interactions: L:A.40, L:W.53, L:W.53, L:W.53, L:W.53, K:I.26, K:F.36 Metal complexes: L:H.44 BCL.28: 19 residues within 4Å: Chain A: I.28, K.31, T.32 Chain K: R.4, F.6, E.7, F.8, S.11, V.12, S.15 Chain L: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Ligands: KGD.3, KGD.23 11 PLIP interactions: 3 interactions with chain K, 6 interactions with chain L, 2 interactions with chain A, Hydrophobic interactions: K:F.8, K:V.12, L:W.14, L:W.14, L:L.17, L:F.18, L:V.30, A:K.31 Hydrogen bonds: K:R.4 Metal complexes: L:H.26 Salt bridges: A:K.31 BCL.36: 17 residues within 4Å: Chain N: G.19, A.23, H.27, V.30, W.38 Chain O: I.39, A.40, A.43, H.44 Chain P: F.6, S.11, I.26 Chain Q: I.54 Ligands: BCL.37, KGD.40, BCL.42, KGD.45 6 PLIP interactions: 1 interactions with chain Q, 1 interactions with chain O, 3 interactions with chain N, 1 interactions with chain P, Hydrophobic interactions: Q:I.54, O:A.43, N:V.30, N:W.38, P:I.26 Metal complexes: N:H.27 BCL.37: 22 residues within 4Å: Chain N: G.19, M.22, A.23, I.26, H.27, F.36 Chain O: I.33, G.36, L.37, A.40, H.44, C.47, W.53 Ligands: BCL.25, BCL.27, KGD.29, BCL.36, KGD.39, KGD.40, BCL.42, BCL.43, KGD.45 8 PLIP interactions: 2 interactions with chain N, 6 interactions with chain O, Hydrophobic interactions: N:I.26, N:F.36, O:A.40, O:W.53, O:W.53, O:W.53, O:W.53 Metal complexes: O:H.44 BCL.38: 19 residues within 4Å: Chain L: I.28, K.31, T.32, I.39 Chain N: F.6, E.7, F.8, S.11, V.12, S.15 Chain O: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Ligands: KGD.26, KGD.29 14 PLIP interactions: 2 interactions with chain N, 6 interactions with chain O, 6 interactions with chain L, Hydrophobic interactions: N:F.8, N:V.12, O:W.14, O:L.17, O:F.18, O:V.30, O:I.33, L:I.28, L:I.28, L:K.31, L:T.32, L:I.39 Metal complexes: O:H.26 Salt bridges: L:K.31 BCL.41: 21 residues within 4Å: Chain P: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain Q: G.36, I.39, A.40, A.43, H.44 Chain R: F.6, S.11, I.26 Ligands: BCL.42, KGD.44, KGD.45, BCL.47, KGD.49 7 PLIP interactions: 5 interactions with chain P, 1 interactions with chain Q, 1 interactions with chain R, Hydrophobic interactions: P:V.13, P:V.30, P:W.38, P:W.38, Q:A.43, R:I.26 Metal complexes: P:H.27 BCL.42: 20 residues within 4Å: Chain P: G.19, M.22, A.23, I.26, H.27, F.36 Chain Q: I.33, G.36, L.37, A.40, H.44, C.47, W.53 Ligands: BCL.36, BCL.37, KGD.40, BCL.41, KGD.44, BCL.47, KGD.49 9 PLIP interactions: 6 interactions with chain Q, 3 interactions with chain P, Hydrophobic interactions: Q:A.40, Q:W.53, Q:W.53, Q:W.53, Q:W.53, P:I.26, P:I.26, P:F.36 Metal complexes: Q:H.44 BCL.43: 18 residues within 4Å: Chain O: I.28, K.31, T.32, I.39 Chain P: E.7, S.11, V.12, S.15 Chain Q: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Ligands: BCL.37, KGD.39, KGD.40 10 PLIP interactions: 3 interactions with chain O, 1 interactions with chain P, 6 interactions with chain Q, Hydrophobic interactions: O:I.28, O:K.31, O:I.39, P:V.12, Q:W.14, Q:L.17, Q:F.18, Q:V.30 Salt bridges: Q:H.26 Metal complexes: Q:H.26 BCL.46: 21 residues within 4Å: Chain R: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain S: G.36, I.39, A.40, H.44 Chain T: F.6, S.11, I.26 Chain U: I.54 Ligands: BCL.47, KGD.49, KGD.50, KGD.52, BCL.53 7 PLIP interactions: 3 interactions with chain R, 3 interactions with chain T, 1 interactions with chain U, Hydrophobic interactions: R:V.13, R:V.30, T:F.6, T:F.6, T:I.26, U:I.54 Metal complexes: R:H.27 BCL.47: 18 residues within 4Å: Chain R: G.19, M.22, A.23, I.26, H.27 Chain S: G.36, L.37, H.44, C.47, W.53 Ligands: BCL.41, BCL.42, KGD.44, BCL.46, KGD.49, KGD.50, KGD.52, BCL.53 4 PLIP interactions: 1 interactions with chain R, 3 interactions with chain S, Hydrophobic interactions: R:I.26, S:W.53, S:W.53 Metal complexes: S:H.44 BCL.48: 19 residues within 4Å: Chain Q: I.28, K.31, T.32, G.35 Chain R: R.4, F.6, E.7, F.8, S.11, V.12, S.15 Chain S: W.14, L.17, F.18, H.26, V.30, Y.34 Ligands: KGD.44, KGD.45 11 PLIP interactions: 5 interactions with chain S, 3 interactions with chain Q, 3 interactions with chain R, Hydrophobic interactions: S:W.14, S:L.17, S:F.18, S:V.30, Q:I.28, Q:K.31, R:F.8, R:V.12 Metal complexes: S:H.26 Salt bridges: Q:K.31 Hydrogen bonds: R:R.4 BCL.51: 20 residues within 4Å: Chain T: V.13, G.19, L.20, A.23, H.27, V.30, W.38 Chain U: G.36, I.39, A.40, A.43, H.44 Chain X: S.11, V.14, I.26 Ligands: KGD.52, BCL.53, KGD.55, BCL.69, KGD.72 7 PLIP interactions: 4 interactions with chain T, 2 interactions with chain X, 1 interactions with chain U, Hydrophobic interactions: T:V.13, T:V.30, T:W.38, X:V.14, X:I.26, U:A.43 Metal complexes: T:H.27 BCL.53: 20 residues within 4Å: Chain T: G.19, M.22, A.23, I.26, H.27, F.36 Chain U: G.36, L.37, A.40, H.44, C.47, W.53 Ligands: BCL.46, BCL.47, KGD.50, BCL.51, KGD.52, KGD.55, BCL.69, KGD.72 6 PLIP interactions: 3 interactions with chain T, 3 interactions with chain U, Hydrophobic interactions: T:I.26, T:F.36, U:W.53, U:W.53 Hydrogen bonds: T:H.27 Metal complexes: U:H.44 BCL.54: 18 residues within 4Å: Chain S: I.28, K.31, T.32, G.35, I.39 Chain T: E.7, F.8, S.11, V.12, S.15 Chain U: W.14, L.17, F.18, H.26, I.33, Y.34 Ligands: KGD.49, KGD.50 12 PLIP interactions: 4 interactions with chain S, 3 interactions with chain T, 5 interactions with chain U, Hydrophobic interactions: S:I.28, S:K.31, S:I.39, T:F.8, T:F.8, T:V.12, U:W.14, U:W.14, U:L.17, U:F.18 Salt bridges: S:K.31 Metal complexes: U:H.26 BCL.56: 13 residues within 4Å: Chain V: Y.87, W.167, F.185, I.189, H.192, L.193 Chain W: M.192, I.195, F.196, L.199 Ligands: BCL.57, BPB.58, BCL.65 11 PLIP interactions: 8 interactions with chain V, 3 interactions with chain W, Hydrophobic interactions: V:Y.87, V:Y.87, V:W.167, V:F.185, V:I.189, V:I.189, V:L.193, W:I.195, W:F.196, W:F.196 Metal complexes: V:H.192 BCL.57: 22 residues within 4Å: Chain V: F.136, W.167, L.170, V.196, S.197, I.199, Y.201, F.206, F.207, H.212, G.215, I.216, S.278, N.279, C.281, I.282 Chain W: Y.186 Ligands: BCL.56, BPB.58, MQE.63, BCL.65, BPB.66 8 PLIP interactions: 8 interactions with chain V, Hydrophobic interactions: V:F.136, V:F.136, V:V.196, V:I.199, V:Y.201, V:F.206, V:I.216 Metal complexes: V:H.212 BCL.65: 21 residues within 4Å: Chain V: F.207 Chain W: F.52, V.115, A.142, L.145, Y.146, W.174, T.175, V.178, S.179, F.185, Y.186, H.191, S.194, I.195, G.269, L.273 Ligands: BCL.56, BCL.57, BPB.60, BPB.66 13 PLIP interactions: 1 interactions with chain V, 12 interactions with chain W, Hydrophobic interactions: V:F.207, W:F.52, W:V.115, W:A.142, W:L.145, W:Y.146, W:V.178, W:F.185, W:F.185, W:Y.186, W:Y.186, W:I.195 Metal complexes: W:H.191 BCL.68: 18 residues within 4Å: Chain X: G.19, L.20, A.23, H.27, V.30, W.38 Chain Y: G.36, I.39, A.40, A.43 Chain Z: F.6, S.11, S.15 Ligands: BCL.69, KGD.71, KGD.72, KGD.74, BCL.76 5 PLIP interactions: 1 interactions with chain Y, 1 interactions with chain Z, 3 interactions with chain X, Hydrophobic interactions: Y:A.43, Z:F.6, X:V.30, X:W.38 Metal complexes: X:H.27 BCL.69: 20 residues within 4Å: Chain X: G.19, M.22, A.23, I.26, H.27, F.36 Chain Y: G.36, L.37, A.40, H.44, C.47, W.53 Ligands: BCL.51, BCL.53, KGD.55, BCL.68, KGD.71, KGD.72, KGD.74, BCL.76 8 PLIP interactions: 2 interactions with chain X, 6 interactions with chain Y, Hydrophobic interactions: X:I.26, X:F.36, Y:A.40, Y:W.53, Y:W.53, Y:W.53, Y:W.53 Metal complexes: Y:H.44 BCL.70: 16 residues within 4Å: Chain U: I.28, K.31, T.32 Chain X: E.7, F.8, S.11, V.12, S.15 Chain Y: W.14, L.17, F.18, H.26, V.30, Y.34 Ligands: KGD.52, KGD.55 12 PLIP interactions: 2 interactions with chain X, 7 interactions with chain Y, 3 interactions with chain U, Hydrophobic interactions: X:F.8, X:V.12, Y:W.14, Y:W.14, Y:L.17, Y:F.18, Y:F.18, Y:V.30, U:I.28, U:K.31, U:K.31 Metal complexes: Y:H.26 BCL.73: 22 residues within 4Å: Chain 0: G.36, I.39, A.40, A.43, H.44, C.47 Chain 1: F.6, S.11, S.15 Chain Z: V.12, V.13, G.19, L.20, A.23, H.27, V.30, W.38 Ligands: KGD.74, BCL.76, KGD.78, KGD.80, BCL.81 7 PLIP interactions: 5 interactions with chain Z, 1 interactions with chain 0, 1 interactions with chain 1, Hydrophobic interactions: Z:V.12, Z:V.13, Z:V.30, Z:W.38, 0:A.43, 1:F.6 Metal complexes: Z:H.27 BCL.76: 21 residues within 4Å: Chain 0: G.36, L.37, H.44, C.47, W.53 Chain X: L.39 Chain Z: G.19, M.22, A.23, I.26, H.27, F.36 Ligands: BCL.68, BCL.69, KGD.71, BCL.73, KGD.74, KGD.78, KGD.80, BCL.81, BCL.82 8 PLIP interactions: 5 interactions with chain 0, 1 interactions with chain X, 2 interactions with chain Z, Hydrophobic interactions: 0:W.53, 0:W.53, 0:W.53, 0:W.53, X:L.39, Z:I.26, Z:F.36 Metal complexes: 0:H.44 BCL.77: 17 residues within 4Å: Chain 0: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Chain Y: I.28, K.31, T.32 Chain Z: F.6, F.8, S.11, V.12, S.15 Ligands: KGD.71, KGD.72 11 PLIP interactions: 6 interactions with chain 0, 3 interactions with chain Z, 2 interactions with chain Y, Hydrophobic interactions: 0:W.14, 0:W.14, 0:L.17, 0:F.18, 0:V.30, Z:F.8, Z:F.8, Z:V.12, Y:K.31 Metal complexes: 0:H.26 Salt bridges: Y:K.31 BCL.79: 25 residues within 4Å: Chain 1: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain 2: G.36, I.39, A.40, A.43, H.44, C.47 Chain 3: F.6, S.11, V.14, S.15, I.26 Chain V: F.60 Ligands: KGD.80, BCL.81, KGD.83, KGD.85, BCL.86 8 PLIP interactions: 3 interactions with chain 1, 1 interactions with chain V, 1 interactions with chain 2, 3 interactions with chain 3, Hydrophobic interactions: 1:V.13, 1:V.30, V:F.60, 2:A.43, 3:F.6, 3:V.14, 3:I.26 Metal complexes: 1:H.27 BCL.81: 18 residues within 4Å: Chain 1: G.19, M.22, A.23, I.26, H.27 Chain 2: I.33, G.36, L.37, H.44, C.47, W.53 Ligands: BCL.73, BCL.76, KGD.78, BCL.79, KGD.83, KGD.85, BCL.86 5 PLIP interactions: 4 interactions with chain 2, 1 interactions with chain 1, Hydrophobic interactions: 2:W.53, 2:W.53, 2:W.53, 1:I.26 Metal complexes: 2:H.44 BCL.82: 19 residues within 4Å: Chain 0: I.28, K.31, T.32, G.35, I.39 Chain 1: F.8, S.11, V.12, S.15 Chain 2: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Ligands: KGD.74, BCL.76, KGD.78 11 PLIP interactions: 4 interactions with chain 0, 6 interactions with chain 2, 1 interactions with chain 1, Hydrophobic interactions: 0:K.31, 0:K.31, 0:I.39, 2:W.14, 2:W.14, 2:L.17, 2:F.18, 2:V.30, 1:V.12 Salt bridges: 0:K.31 Metal complexes: 2:H.26 BCL.84: 22 residues within 4Å: Chain 3: V.13, T.16, G.19, L.20, A.23, H.27, W.38 Chain 4: G.36, I.39, A.40, A.43, H.44 Chain 5: F.6, S.11, V.14, S.15 Chain V: F.55 Ligands: KGD.85, BCL.86, KGD.88, KGD.91, BCL.92 10 PLIP interactions: 2 interactions with chain V, 2 interactions with chain 4, 3 interactions with chain 5, 3 interactions with chain 3, Hydrophobic interactions: V:F.55, V:F.55, 4:A.43, 5:F.6, 5:V.14, 5:V.14, 3:V.13, 3:L.20 Hydrogen bonds: 4:H.44 Metal complexes: 3:H.27 BCL.86: 20 residues within 4Å: Chain 3: M.22, A.23, I.26, H.27, F.36 Chain 4: I.33, G.36, L.37, A.40, H.44, C.47, W.53 Chain 6: I.33 Ligands: BCL.79, BCL.81, BCL.84, KGD.85, KGD.88, BCL.90, KGD.91 10 PLIP interactions: 6 interactions with chain 4, 1 interactions with chain 6, 3 interactions with chain 3, Hydrophobic interactions: 4:A.40, 4:W.53, 4:W.53, 4:W.53, 4:W.53, 6:I.33, 3:I.26, 3:I.26, 3:F.36 Metal complexes: 4:H.44 BCL.87: 12 residues within 4Å: Chain 2: K.31, T.32 Chain 3: S.11, S.15 Chain 4: W.14, L.17, F.18, H.26, I.33, Y.34 Ligands: KGD.80, KGD.83 9 PLIP interactions: 2 interactions with chain 2, 7 interactions with chain 4, Hydrophobic interactions: 2:K.31, 4:W.14, 4:W.14, 4:L.17, 4:F.18, 4:F.18, 4:I.33 Salt bridges: 2:K.31 Metal complexes: 4:H.26 BCL.89: 17 residues within 4Å: Chain 5: V.13, T.16, G.19, L.20, A.23, H.27, V.30, W.38 Chain 6: G.36, I.39, A.40, H.44 Chain 7: M.6, F.9, I.24 Ligands: KGD.91, BCL.92 10 PLIP interactions: 6 interactions with chain 5, 4 interactions with chain 7, Hydrophobic interactions: 5:V.13, 5:T.16, 5:V.30, 5:W.38, 5:W.38, 7:F.9, 7:F.9, 7:F.9, 7:I.24 Metal complexes: 5:H.27 BCL.90: 15 residues within 4Å: Chain 4: K.31, T.32 Chain 5: F.8, S.11, S.15 Chain 6: W.14, L.17, F.18, H.26, V.30, I.33, Y.34 Ligands: KGD.85, BCL.86, KGD.88 9 PLIP interactions: 6 interactions with chain 6, 2 interactions with chain 4, 1 interactions with chain 5, Hydrophobic interactions: 6:W.14, 6:W.14, 6:L.17, 6:F.18, 6:V.30, 4:K.31, 5:F.8 Metal complexes: 6:H.26 Salt bridges: 4:K.31 BCL.92: 15 residues within 4Å: Chain 5: I.26, H.27, F.36 Chain 6: L.37, A.40, H.44, W.53 Chain 7: L.13, A.16, T.17, F.20 Ligands: BCL.84, KGD.88, BCL.89, KGD.91 12 PLIP interactions: 6 interactions with chain 6, 4 interactions with chain 7, 2 interactions with chain 5, Hydrophobic interactions: 6:A.40, 6:W.53, 6:W.53, 6:W.53, 6:W.53, 7:L.13, 7:A.16, 7:F.20, 7:F.20, 5:I.26, 5:F.36 Metal complexes: 6:H.44

30 x KGD: beta,psi-caroten-4-one(Non-covalent)

KGD.3: 9 residues within 4Å: Chain A: L.46, W.50 Chain L: L.37, I.54 Ligands: BCL.1, KGD.23, BCL.24, BCL.27, BCL.28 3 PLIP interactions: 2 interactions with chain L, 1 interactions with chain A Hydrophobic interactions: L:L.37, L:I.54, A:W.50 KGD.7: 12 residues within 4Å: Chain C: T.32, I.39, A.43, L.46, W.50 Chain E: I.54, R.55 Ligands: BCL.4, BCL.5, BCL.10, BCL.11, KGD.30 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain E Hydrophobic interactions: C:A.43, C:W.50, C:W.50, E:I.54 KGD.9: 16 residues within 4Å: Chain B: L.24, H.27 Chain D: S.15, T.16, L.18, G.19, M.22 Chain E: V.25, T.32 Chain F: F.6 Ligands: BCL.4, BCL.5, BCL.8, BCL.10, KGD.12, BCL.17 4 PLIP interactions: 2 interactions with chain E, 1 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: E:V.25, E:T.32, B:L.24, D:L.18 KGD.12: 7 residues within 4Å: Chain E: W.50 Chain G: I.54 Ligands: BCL.8, KGD.9, BCL.10, BCL.16, BCL.17 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain G Hydrophobic interactions: E:W.50, G:I.54 KGD.14: 16 residues within 4Å: Chain D: L.24, F.28 Chain F: V.12, S.15, T.16, G.19 Chain G: V.25, T.32, I.33 Chain H: F.6, S.11 Ligands: BCL.8, BCL.10, BCL.13, KGD.18, BCL.21 6 PLIP interactions: 2 interactions with chain D, 3 interactions with chain G, 1 interactions with chain F Hydrophobic interactions: D:L.24, D:F.28, G:V.25, G:T.32, G:I.33, F:V.12 KGD.15: 16 residues within 4Å: Chain F: L.24, F.28 Chain H: V.12, S.15, T.16, G.19, M.22 Chain I: V.25 Chain J: F.6, S.11 Ligands: BCL.2, BCL.13, BCL.16, BCL.19, BCL.20, KGD.22 4 PLIP interactions: 2 interactions with chain F, 1 interactions with chain H, 1 interactions with chain I Hydrophobic interactions: F:L.24, F:F.28, H:V.12, I:V.25 KGD.18: 9 residues within 4Å: Chain G: I.39, A.43, W.50 Chain I: I.54 Ligands: BCL.13, KGD.14, BCL.16, BCL.20, BCL.21 4 PLIP interactions: 3 interactions with chain G, 1 interactions with chain I Hydrophobic interactions: G:I.39, G:A.43, G:W.50, I:I.54 KGD.22: 8 residues within 4Å: Chain A: I.54 Chain I: A.43, W.50 Ligands: BCL.1, BCL.2, KGD.15, BCL.19, BCL.20 3 PLIP interactions: 2 interactions with chain I, 1 interactions with chain A Hydrophobic interactions: I:A.43, I:W.50, A:I.54 KGD.23: 17 residues within 4Å: Chain A: V.25, V.29 Chain H: L.24, H.27, F.28 Chain J: V.12, S.15, T.16, L.18, G.19, M.22 Chain K: F.6 Ligands: KGD.3, BCL.19, BCL.20, BCL.24, BCL.28 6 PLIP interactions: 2 interactions with chain H, 2 interactions with chain J, 2 interactions with chain A Hydrophobic interactions: H:L.24, H:F.28, J:V.12, J:L.18, A:V.25, A:V.29 KGD.26: 16 residues within 4Å: Chain J: W.38 Chain K: V.12, S.15, T.16, G.19, M.22 Chain L: V.25, T.32, I.33 Chain N: F.6 Ligands: BCL.1, BCL.24, BCL.25, BCL.27, KGD.29, BCL.38 4 PLIP interactions: 2 interactions with chain L, 1 interactions with chain K, 1 interactions with chain J Hydrophobic interactions: L:V.25, L:I.33, K:V.12, J:W.38 KGD.29: 10 residues within 4Å: Chain L: I.39, L.46, W.50 Chain O: Y.34, I.54 Ligands: BCL.25, KGD.26, BCL.27, BCL.37, BCL.38 3 PLIP interactions: 2 interactions with chain L, 1 interactions with chain O Hydrophobic interactions: L:I.39, L:W.50, O:I.54 KGD.30: 20 residues within 4Å: Chain B: V.12, S.15, T.16, L.18, G.19, M.22 Chain C: V.25, V.29, T.32, I.33 Chain D: F.6, S.11 Chain M: M.31, A.34, S.35, I.38 Ligands: BCL.4, BCL.5, KGD.7, BCL.11 6 PLIP interactions: 3 interactions with chain C, 2 interactions with chain B, 1 interactions with chain M Hydrophobic interactions: C:V.25, C:V.29, C:I.33, B:V.12, B:L.18, M:I.38 KGD.35: 9 residues within 4Å: Chain 8: T.7, M.11 Chain B: L.18 Chain C: W.14 Chain M: F.20, S.28, M.31, S.35 Ligands: MQE.59 5 PLIP interactions: 2 interactions with chain M, 1 interactions with chain C, 2 interactions with chain B Hydrophobic interactions: M:F.20, M:F.20, C:W.14, B:L.18, B:L.18 KGD.39: 14 residues within 4Å: Chain K: H.27, W.38 Chain N: V.12, S.15 Chain O: V.25, I.28, V.29, T.32, I.33 Chain P: F.6 Ligands: BCL.25, BCL.27, BCL.37, BCL.43 7 PLIP interactions: 1 interactions with chain N, 5 interactions with chain O, 1 interactions with chain K Hydrophobic interactions: N:V.12, O:V.25, O:I.28, O:V.29, O:T.32, O:I.33, K:W.38 KGD.40: 9 residues within 4Å: Chain O: T.32, I.39, L.46, W.50 Chain Q: I.54 Ligands: BCL.36, BCL.37, BCL.42, BCL.43 4 PLIP interactions: 1 interactions with chain Q, 3 interactions with chain O Hydrophobic interactions: Q:I.54, O:I.39, O:W.50, O:W.50 KGD.44: 8 residues within 4Å: Chain Q: I.39, L.46, W.50 Ligands: BCL.41, BCL.42, KGD.45, BCL.47, BCL.48 2 PLIP interactions: 2 interactions with chain Q Hydrophobic interactions: Q:W.50, Q:W.50 KGD.45: 16 residues within 4Å: Chain N: L.24, H.27 Chain P: V.12, S.15, T.16, G.19 Chain Q: V.25, V.29, T.32 Chain R: F.6, S.11 Ligands: BCL.36, BCL.37, BCL.41, KGD.44, BCL.48 6 PLIP interactions: 1 interactions with chain P, 2 interactions with chain N, 3 interactions with chain Q Hydrophobic interactions: P:V.12, N:L.24, N:H.27, Q:V.25, Q:V.29, Q:T.32 KGD.49: 16 residues within 4Å: Chain P: L.24, F.28, W.38 Chain R: S.15 Chain S: V.25, I.28, V.29, T.32, I.33 Chain T: F.6 Ligands: BCL.41, BCL.42, BCL.46, BCL.47, KGD.50, BCL.54 8 PLIP interactions: 5 interactions with chain S, 3 interactions with chain P Hydrophobic interactions: S:V.25, S:I.28, S:V.29, S:T.32, S:I.33, P:L.24, P:F.28, P:W.38 KGD.50: 9 residues within 4Å: Chain S: I.39, A.43, L.46, W.50 Ligands: BCL.46, BCL.47, KGD.49, BCL.53, BCL.54 3 PLIP interactions: 3 interactions with chain S Hydrophobic interactions: S:A.43, S:W.50, S:W.50 KGD.52: 17 residues within 4Å: Chain T: V.12, S.15, T.16, L.18, G.19, M.22 Chain U: V.25, T.32, I.33 Chain X: F.6, S.11 Ligands: BCL.46, BCL.47, BCL.51, BCL.53, KGD.55, BCL.70 5 PLIP interactions: 2 interactions with chain T, 3 interactions with chain U Hydrophobic interactions: T:V.12, T:L.18, U:V.25, U:T.32, U:I.33 KGD.55: 11 residues within 4Å: Chain U: T.32, I.39, A.43, L.46, C.47, W.50 Ligands: BCL.51, KGD.52, BCL.53, BCL.69, BCL.70 5 PLIP interactions: 5 interactions with chain U Hydrophobic interactions: U:I.39, U:A.43, U:L.46, U:W.50, U:W.50 KGD.71: 9 residues within 4Å: Chain 0: I.54 Chain Y: T.32, L.46, W.50 Ligands: BCL.68, BCL.69, KGD.72, BCL.76, BCL.77 3 PLIP interactions: 1 interactions with chain 0, 2 interactions with chain Y Hydrophobic interactions: 0:I.54, Y:W.50, Y:W.50 KGD.72: 21 residues within 4Å: Chain T: L.24, H.27, F.28 Chain X: V.12, S.15, T.16, L.18, G.19, M.22 Chain Y: V.25, V.29, T.32, I.33 Chain Z: F.6, S.11 Ligands: BCL.51, BCL.53, BCL.68, BCL.69, KGD.71, BCL.77 7 PLIP interactions: 4 interactions with chain Y, 1 interactions with chain X, 2 interactions with chain T Hydrophobic interactions: Y:V.25, Y:V.29, Y:T.32, Y:I.33, X:V.12, T:L.24, T:F.28 KGD.74: 16 residues within 4Å: Chain 0: V.25, V.29, T.32, I.33 Chain 1: F.6 Chain X: L.24 Chain Z: S.15, T.16, G.19, M.22 Ligands: BCL.68, BCL.69, BCL.73, BCL.76, KGD.78, BCL.82 5 PLIP interactions: 4 interactions with chain 0, 1 interactions with chain X Hydrophobic interactions: 0:V.25, 0:V.29, 0:T.32, 0:I.33, X:L.24 KGD.78: 10 residues within 4Å: Chain 0: I.39, L.46, C.47, W.50 Chain 2: L.37 Ligands: BCL.73, KGD.74, BCL.76, BCL.81, BCL.82 3 PLIP interactions: 2 interactions with chain 0, 1 interactions with chain 2 Hydrophobic interactions: 0:I.39, 0:W.50, 2:L.37 KGD.80: 17 residues within 4Å: Chain 1: V.12, S.15, T.16, L.18, G.19, M.22 Chain 2: V.25, V.29, T.32 Chain 3: S.11 Chain Z: L.24, H.27 Ligands: BCL.73, BCL.76, BCL.79, KGD.83, BCL.87 5 PLIP interactions: 3 interactions with chain 2, 1 interactions with chain Z, 1 interactions with chain 1 Hydrophobic interactions: 2:V.25, 2:V.29, 2:T.32, Z:L.24, 1:V.12 KGD.83: 9 residues within 4Å: Chain 2: I.39, L.46, W.50 Chain 4: L.37, I.54 Ligands: BCL.79, KGD.80, BCL.81, BCL.87 5 PLIP interactions: 3 interactions with chain 2, 2 interactions with chain 4 Hydrophobic interactions: 2:I.39, 2:W.50, 2:W.50, 4:L.37, 4:I.54 KGD.85: 17 residues within 4Å: Chain 1: H.27 Chain 3: V.12, S.15, L.18, G.19, M.22 Chain 4: V.25, I.28, V.29, T.32 Chain 5: F.6 Ligands: BCL.79, BCL.81, BCL.84, BCL.86, KGD.88, BCL.90 4 PLIP interactions: 2 interactions with chain 4, 2 interactions with chain 3 Hydrophobic interactions: 4:I.28, 4:T.32, 3:V.12, 3:L.18 KGD.88: 6 residues within 4Å: Chain 4: W.50 Ligands: BCL.84, KGD.85, BCL.86, BCL.90, BCL.92 2 PLIP interactions: 2 interactions with chain 4 Hydrophobic interactions: 4:W.50, 4:W.50 KGD.91: 19 residues within 4Å: Chain 3: L.20, L.24 Chain 5: V.12, S.15, T.16, G.19, M.22 Chain 6: V.25, I.28, V.29, T.32, I.33 Chain 7: F.20, M.23, I.24 Ligands: BCL.84, BCL.86, BCL.89, BCL.92 11 PLIP interactions: 1 interactions with chain 5, 2 interactions with chain 3, 5 interactions with chain 6, 1 interactions with chain M, 2 interactions with chain 7 Hydrophobic interactions: 5:V.12, 3:L.20, 3:L.24, 6:V.25, 6:I.28, 6:V.29, 6:T.32, 6:I.33, 7:F.20, 7:I.24 Hydrogen bonds: M:L.8

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)

HEM.31: 21 residues within 4Å: Chain M: M.78, Y.81, P.88, Q.89, A.90, V.91, Q.92, V.93, L.94, S.103, M.106, V.107, D.117, C.118, C.121, H.122, F.127, A.128, K.139, A.142, R.143 12 PLIP interactions: 12 interactions with chain M, Hydrophobic interactions: M:M.106, M:V.107, M:F.127, M:A.142 Hydrogen bonds: M:Y.81, M:Q.89, M:A.90, M:Q.92, M:V.93, M:L.94 Salt bridges: M:R.143 Metal complexes: M:H.122 HEM.32: 15 residues within 4Å: Chain M: K.138, M.145, M.146, M.148, S.149, T.170, C.171, C.174, H.175, A.180, G.181, L.182, M.286, A.287, K.289 8 PLIP interactions: 8 interactions with chain M, Hydrophobic interactions: M:M.145 Hydrogen bonds: M:G.181, M:L.182 Salt bridges: M:K.138, M:K.289 pi-Stacking: M:H.175, M:H.175 Metal complexes: M:H.175 HEM.33: 24 residues within 4Å: Chain M: Y.205, P.206, G.207, G.208, L.209, V.210, V.211, T.212, N.225, Q.226, M.229, M.232, N.233, G.239, C.240, C.243, H.244, F.249, P.250, K.257, S.260, I.261 Chain V: Y.204 Chain W: I.180 14 PLIP interactions: 1 interactions with chain W, 12 interactions with chain M, 1 interactions with chain V, Hydrophobic interactions: W:I.180, M:L.209, M:M.229, M:F.249, M:F.249, M:F.249, M:K.257, M:I.261, V:Y.204 Hydrogen bonds: M:L.209, M:V.211, M:T.212 Salt bridges: M:K.257 Metal complexes: M:H.244 HEM.34: 19 residues within 4Å: Chain M: T.157, L.160, V.164, G.165, Y.167, I.169, M.232, M.236, H.259, S.260, M.263, M.266, T.267, S.292, C.293, C.296, H.297, N.301, P.303 8 PLIP interactions: 8 interactions with chain M, Hydrophobic interactions: M:L.160, M:I.169, M:I.169, M:M.263, M:P.303 Hydrogen bonds: M:Y.167, M:H.259 Metal complexes: M:H.297

3 x BPB: BACTERIOPHEOPHYTIN B(Non-covalent)

BPB.58: 26 residues within 4Å: Chain V: I.80, G.83, V.84, Y.87, T.128, A.132, F.136, W.139, Q.143, A.159, F.160, V.163, L.187, G.188, I.189, G.271, V.275 Chain W: L.199, L.203, A.206, M.207, W.241, M.245 Ligands: BCL.56, BCL.57, MQE.63 15 PLIP interactions: 12 interactions with chain V, 3 interactions with chain W Hydrophobic interactions: V:I.80, V:I.80, V:V.84, V:T.128, V:A.132, V:A.159, V:F.160, V:F.160, V:L.187, V:I.189, V:V.275, W:L.199, W:L.203, W:A.206 Hydrogen bonds: V:Q.143 BPB.60: 17 residues within 4Å: Chain V: F.220, T.223, L.224, H.227, I.253, L.254 Chain W: S.48, F.49, W.118, L.122, L.135, G.138, F.139, A.142, A.266 Ligands: BCL.65, BPB.66 11 PLIP interactions: 7 interactions with chain W, 4 interactions with chain V Hydrophobic interactions: W:F.49, W:W.118, W:W.118, W:L.135, W:F.139, W:A.142, W:A.266, V:F.220, V:T.223, V:L.224, V:L.254 BPB.66: 20 residues within 4Å: Chain V: A.213, I.216, T.217, F.220 Chain W: F.52, I.59, L.111, Y.146, Y.150, P.164, F.168, I.171, L.172, W.174, T.175 Ligands: BCL.57, BPB.60, PGV.62, BCL.65, MQE.67 9 PLIP interactions: 8 interactions with chain W, 1 interactions with chain V Hydrophobic interactions: W:F.52, W:I.59, W:L.111, W:P.164, W:I.171, W:L.172, W:W.174, V:T.217 Hydrogen bonds: W:Y.150

3 x MQE: 2-methyl-3-[(2E,6E,10E,14E,18E,22E,26E,30E,34E,38E)-3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,1 4,18,22,26,30,34,38,42-undecaen-1-yl]naphthalene-1,4-dione(Non-covalent)

MQE.59: 20 residues within 4Å: Chain 8: T.7, L.10, L.14, F.17, L.18, V.21, L.24 Chain V: M.228, H.229, A.232, H.247, W.250, Y.256, S.257, I.258, G.259, V.266, T.270 Chain W: L.31 Ligands: KGD.35 16 PLIP interactions: 1 interactions with chain W, 8 interactions with chain V, 7 interactions with chain 8 Hydrophobic interactions: W:L.31, V:M.228, V:Y.256, V:I.258, V:I.258, V:V.266, 8:L.10, 8:L.14, 8:L.14, 8:F.17, 8:F.17, 8:L.18, 8:L.24 Hydrogen bonds: V:H.229, V:I.258 pi-Stacking: V:W.250 MQE.63: 29 residues within 4Å: Chain 9: F.34 Chain V: I.64, F.67, V.69, I.77, V.84, L.88, W.139, R.142 Chain W: L.204, M.207, H.208, T.211, Q.238, W.241, M.245, W.247, N.248, A.249, N.250, I.254 Chain Z: L.17, L.20, L.24, L.25, F.28 Ligands: BCL.57, BPB.58, PGV.75 16 PLIP interactions: 5 interactions with chain V, 6 interactions with chain W, 4 interactions with chain Z, 1 interactions with chain 9 Hydrophobic interactions: V:I.64, V:F.67, V:V.69, V:L.88, V:W.139, W:L.204, W:Q.238, W:W.241, W:W.247, W:I.254, Z:L.20, Z:L.24, Z:L.24, Z:F.28, 9:F.34 Hydrogen bonds: W:A.249 MQE.67: 8 residues within 4Å: Chain W: F.52, I.59, Y.63, H.166, G.167, F.168, I.171 Ligands: BPB.66 4 PLIP interactions: 4 interactions with chain W Hydrophobic interactions: W:F.52, W:Y.63, W:I.171 Hydrogen bonds: W:Y.63

3 x PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE(Non-covalent)

PGV.61: 10 residues within 4Å: Chain 9: P.13, P.15, Y.20, F.24 Chain T: F.28 Chain V: N.99, L.101 Chain W: K.291 Chain X: L.25, F.28 7 PLIP interactions: 2 interactions with chain V, 3 interactions with chain 9, 2 interactions with chain T Hydrophobic interactions: V:L.101, 9:Y.20, 9:F.24, 9:F.24, T:F.28, T:F.28 Hydrogen bonds: V:N.99 PGV.62: 15 residues within 4Å: Chain M: N.191, T.192, L.193 Chain V: Y.208, P.210, A.213, T.217, W.296, W.299, D.300 Chain W: E.77, W.79, N.80, R.169 Ligands: BPB.66 12 PLIP interactions: 5 interactions with chain W, 5 interactions with chain V, 2 interactions with chain M Hydrophobic interactions: W:W.79, W:W.79, W:W.79, V:Y.208, V:Y.208, V:P.210, V:A.213, V:W.296 Hydrogen bonds: W:N.80, M:N.191, M:L.193 Salt bridges: W:R.169 PGV.75: 8 residues within 4Å: Chain V: G.65, R.66, F.67 Chain W: M.245, G.246 Chain Z: R.9, L.17 Ligands: MQE.63 7 PLIP interactions: 4 interactions with chain V, 3 interactions with chain Z Hydrophobic interactions: V:F.67, Z:L.17 Hydrogen bonds: V:G.65, V:R.66, Z:R.9, Z:R.9 Salt bridges: V:R.66

1 x FE: FE (III) ION(Non-covalent)

FE.64: 5 residues within 4Å: Chain V: H.229, H.264 Chain W: H.208, E.223, H.255 4 PLIP interactions: 3 interactions with chain W, 1 interactions with chain V Metal complexes: W:H.208, W:E.223, W:H.255, V:H.229

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xin, J. et al., Carotenoid assembly regulates quinone diffusion and the Roseiflexus castenholzii reaction center-light harvesting complex architecture. Elife (2023)

Release Date

2023-09-20

Peptides

Beta subunit of light-harvesting 1: ACEGILOQSUY0246
Alpha subunit of light-harvesting 1: BDFHJKNPRTXZ135
MULTIHEME_CYTC DOMAIN-CONTAINING PROTEIN: M
Reaction center protein L chain: V
Reaction center protein M chain: W
Subunit X: 7
Subunit Y: 8
Subunit Z: 9

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
0

C
2

E
4

G
6

I
8

L
B

O
E

Q
G

S
I

U
K

Y
O

0
Q

2
S

4
U

6
W

B
1

D
3

F
5

H
7

J
9

K
A

N
D

P
F

R
H

T
J

X
N

Z
P

1
R

3
T

5
V

M
C

V
L

W
M

7
X

8
Y

9
Z

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Beta subunit of light-harvesting 1

Alpha subunit of light-harvesting 1

MULTIHEME_CYTC DOMAIN-CONTAINING PROTEIN

Reaction center protein L chain

Reaction center protein M chain

Subunit X

Subunit Y

Subunit Z

Related Entries With Identical Sequence