SMTL ID : 5yq7.1

Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-15-1-1-15-1-1-1-mer
Ligands
48 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)(Covalent)
3 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
2 x MQE: 2-methyl-3-[(2E,6E,10E,14E,18E,22E,26E,30E,34E,38E)-3,7,11,15,19,23,27,31,35,39,43-undecamethyltetratetraconta-2,6,10,14,18,22,26,30,34,38,42-undecaen-1-yl]naphthalene-1,4-dione(Covalent)(Non-covalent)
1 x FE: FE (III) ION(Non-covalent)
4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)(Non-covalent)
14 x KGD: beta,psi-caroten-4-one(Non-covalent)(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Xin, Y.Y. et al., Cryo-EM structure of the RC-LH core complex from an early branching photosynthetic prokaryote. Nat Commun (2018)
Release Date
2018-05-02
Peptides
Beta subunit of light-harvesting 1: ABCEFGHIKLMNPQR
Precursor for L subunits of photosynthetic reaction center: D
Cytochrome subunit of photosynthetic reaction center: J
Alpha subunit of light-harvesting 1: OSTUVWXYZ012345
Peptide from Precursor for L and M subunits of photosynthetic reaction center: 6
Subunit X: 7
Precursor for M subunits of photosynthetic reaction center: 8
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
E
B
B
C
0
E
8
F
6
G
4
H
2
I
K
K
I
L
G
M
W
N
U
P
S
Q
Q
R
O
D
L
J
C
O
T
S
V
T
R
U
P
V
N
W
J
X
H
Y
F
Z
D
0
A
1
9
2
7
3
5
4
3
5
1
6
Y
7
X
8
M
Membrane
We predict this structure to be a membrane protein.

Beta subunit of light-harvesting 1

Toggle Identical (ABCEFGHIKLMNPQR)

Precursor for L subunits of photosynthetic reaction center

Cytochrome subunit of photosynthetic reaction center

Alpha subunit of light-harvesting 1

Toggle Identical (OSTUVWXYZ012345)

Peptide from Precursor for L and M subunits of photosynthetic reaction center

Subunit X

Precursor for M subunits of photosynthetic reaction center

Related Entries With Identical Sequence

1izl.1 | 3a0h.1 | 4pi0.1 | 4pi2.1 | 4uq8.1 | 4v3p.21 | 4v7r.60 | 4wz7.1 | 4y3u.1 | 5gae.1 | 5gak.1 | 5lqx.1 | 5lqy.1 | 5lqz.1 | 6ftg.1 | 6fti.1 | 6ftj.1 | 6h82.1 | 6h8k.23 | 6h8k.32 | 6h8k.33 | 6h8k.37 | 6hd7.1 | 6nuw.1 | 6qj4.1 | 6sri.1 | 6srs.1 | 6x89.1 | 6yxy.26 | 6yxy.32  more...