SMTL ID : 8k6l.1

Cryo-EM structure of human OATP1B1 in complex with DCF

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 1 residues within 4Å: Chain A: N.503 No protein-ligand interaction detected (PLIP)

1 x IOQ: 2',7'-bis(chloranyl)-3',6'-bis(oxidanyl)spiro[2-benzofuran-3,9'-xanthene]-1-one(Non-covalent)

IOQ.2: 9 residues within 4Å: Chain A: Y.352, A.355, F.356, F.386, Q.541, N.544, L.545, S.548, G.552 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.352, A:Y.352, A:Y.352, A:Y.352, A:F.356, A:F.386 Hydrogen bonds: A:Q.541, A:N.544

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: Y.502, N.516 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.502

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shan, Z. et al., Cryo-EM structures of human organic anion transporting polypeptide OATP1B1. Cell Res. (2023)

Release Date

2023-09-13

Peptides

Solute carrier organic anion transporter family member 1B1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Solute carrier organic anion transporter family member 1B1

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