SMTL ID : 8ois.1

28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
17 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
126 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
1 x MET: METHIONINE(Non-functional Binders)
1 x ZN: ZINC ION(Non-covalent)
2 x FS2: FE-S-O HYBRID CLUSTER(Non-covalent)
1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Saurer, M. et al., Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science (2023)
Release Date
2023-06-14
Peptides
39S ribosomal protein L19, mitochondrial: A
39S ribosomal protein L55, mitochondrial: B
28S ribosomal protein S35, mitochondrial: D
28S ribosomal protein S24, mitochondrial: E
Aurora kinase A-interacting protein: F
28S ribosomal protein S6, mitochondrial: G
28S ribosomal protein S7, mitochondrial: H
28S ribosomal protein S10, mitochondrial: J
28S ribosomal protein S12, mitochondrial: L
28S ribosomal protein S14, mitochondrial: M
28S ribosomal protein S15, mitochondrial: N
28S ribosomal protein S16, mitochondrial: O
28S ribosomal protein S17, mitochondrial: P
28S ribosomal protein S18b, mitochondrial: Q
28S ribosomal protein S18c, mitochondrial: R
28S ribosomal protein S21, mitochondrial: S
28S ribosomal protein S22, mitochondrial: T
28S ribosomal protein S23, mitochondrial: U
28S ribosomal protein S25, mitochondrial: V
28S ribosomal protein S26, mitochondrial: W
28S ribosomal protein S27, mitochondrial: X
28S ribosomal protein S28, mitochondrial: Y
28S ribosomal protein S29, mitochondrial: Z
28S ribosomal protein S31, mitochondrial: 0
28S ribosomal protein S33, mitochondrial: 1
Peptide chain release factor 1, mitochondrial,mtRF1(AAQ): 2
28S ribosomal protein S2, mitochondrial: 3
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1: 4
28S ribosomal protein S5, mitochondrial: 5
Pentatricopeptide repeat domain-containing protein 3, mitochondrial: 6
28S ribosomal protein S9, mitochondrial: 7
28S ribosomal protein S11, mitochondrial: 8
28S ribosomal protein S34, mitochondrial: 9
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
BX
B
Bd
D
AB
E
AC
F
AD
G
AE
H
AF
J
AH
L
AJ
M
AK
N
AL
O
AM
P
AN
Q
AO
R
AP
S
AQ
T
AR
U
AS
V
AT
W
AU
X
AV
Y
AW
Z
AX
0
AY
1
AZ
2
Aa
3
Ab
4
Ac
5
Ad
6
Ae
7
Ag
8
Ai
9
Aj

39S ribosomal protein L19, mitochondrial

39S ribosomal protein L55, mitochondrial

28S ribosomal protein S35, mitochondrial

28S ribosomal protein S24, mitochondrial

Aurora kinase A-interacting protein

28S ribosomal protein S6, mitochondrial

28S ribosomal protein S7, mitochondrial

28S ribosomal protein S10, mitochondrial

28S ribosomal protein S12, mitochondrial

28S ribosomal protein S14, mitochondrial

28S ribosomal protein S15, mitochondrial

28S ribosomal protein S16, mitochondrial

28S ribosomal protein S17, mitochondrial

28S ribosomal protein S18b, mitochondrial

28S ribosomal protein S18c, mitochondrial

28S ribosomal protein S21, mitochondrial

28S ribosomal protein S22, mitochondrial

28S ribosomal protein S23, mitochondrial

28S ribosomal protein S25, mitochondrial

28S ribosomal protein S26, mitochondrial

28S ribosomal protein S27, mitochondrial

28S ribosomal protein S28, mitochondrial

28S ribosomal protein S29, mitochondrial

28S ribosomal protein S31, mitochondrial

28S ribosomal protein S33, mitochondrial

Peptide chain release factor 1, mitochondrial,mtRF1(AAQ)

28S ribosomal protein S2, mitochondrial

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

28S ribosomal protein S5, mitochondrial

Pentatricopeptide repeat domain-containing protein 3, mitochondrial

28S ribosomal protein S9, mitochondrial

28S ribosomal protein S11, mitochondrial

28S ribosomal protein S34, mitochondrial

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