SMTL ID : 8qv6.1

Structure of human SPNS2 in DDM

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)

LMT.1: 11 residues within 4Å: Chain A: Y.120, I.238, S.326, T.329, L.332, G.333, I.336, T.370, E.433, F.437, W.440 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.238, A:L.332, A:I.336, A:T.370, A:E.433, A:F.437, A:W.440 Hydrogen bonds: A:R.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H.Z. et al., Transport and inhibition of the sphingosine-1-phosphate exporter SPNS2. Nat Commun (2025)

Release Date

2025-02-19

Peptides

Sphingosine-1-phosphate transporter SPNS2: A
Nanobody D12: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Sphingosine-1-phosphate transporter SPNS2

Nanobody D12

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