8r81.1 | SWISS-MODEL Template Library

SMTL ID : 8r81.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

2 x Y8B: 2,4,6-trimethyl-~{N}-[1-(phenylmethyl)benzimidazol-5-yl]benzenesulfonamide(Non-covalent)

Y8B.2:	16 residues within 4Å: Chain A: S.90, L.91, M.125, S.129, F.133, F.163, Q.167, F.170, W.181, Y.188, H.289, L.293, I.296, F.302, M.307, F.311 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.91, A:L.91, A:F.163, A:F.170, A:W.181, A:Y.188, A:Y.188, A:H.289, A:L.293, A:L.293, A:I.296, A:F.302 Hydrogen bonds: A:S.129, A:S.129 pi-Stacking: A:F.170, A:W.181
Y8B.5:	16 residues within 4Å: Chain B: S.90, L.91, M.125, S.129, F.133, F.163, Q.167, F.170, W.181, Y.188, H.289, L.293, I.296, F.302, M.307, F.311 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:L.91, B:L.91, B:F.163, B:F.170, B:W.181, B:Y.188, B:Y.188, B:H.289, B:L.293, B:L.293, B:I.296, B:F.302 Hydrogen bonds: B:S.129, B:S.129 pi-Stacking: B:F.170, B:W.181

2 x GOL: GLYCEROL(Non-functional Binders)

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Delfosse, V. et al., Crystal structure of the hPXR-LBD in complex with compound JMV6845. To Be Published

Release Date

2025-06-11

Peptides

Nuclear receptor subfamily 1 group I member 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A