SMTL ID : 8rej.1

Crystal structure of PPAR gamma Ligand Binding Domain in complex with the ligand LBB78

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.16 Å

Oligo State

homo-dimer

Ligands

1 x WUE: (2~{S})-2-(4-naphthalen-1-ylphenoxy)-3-phenyl-propanoic acid(Non-covalent)

WUE.1: 17 residues within 4Å: Chain A: F.109, Q.110, C.112, Q.113, S.116, H.150, Y.154, L.157, F.190, H.276, L.280, I.283, K.284, M.290, S.291, L.296, Y.300 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.157, A:F.190, A:L.280, A:L.280, A:I.283, A:K.284 Hydrogen bonds: A:S.116, A:Y.154, A:Y.154, A:Y.300 Salt bridges: A:H.150, A:H.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laghezza, A. et al., A chemical modification of a peroxisome proliferator-activated receptor pan agonist produced a shift to a new dual alpha/gamma partial agonist endowed with mitochondrial pyruvate carrier inhibition and antidiabetic properties. Eur.J.Med.Chem. (2024)

Release Date

2024-10-16

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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