SMTL ID : 8sbn.1

Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (P21 Form 1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

monomer

Ligands

3 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.1: 7 residues within 4Å: Chain A: T.12, I.38, T.104, M.108, L.116, W.118, K.131 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.38, A:L.116, A:W.118 Water bridges: A:T.104, A:K.131 HEZ.2: 5 residues within 4Å: Chain A: A.44, R.45, V.48, R.75, R.79 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:R.79 Hydrogen bonds: A:A.44, A:R.75, A:R.75, A:R.75, A:R.79 HEZ.3: 5 residues within 4Å: Chain A: P.53, A.54, A.57, L.95, L.99 No protein-ligand interaction detected (PLIP)

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: L.56, A.59, E.60, I.67 No protein-ligand interaction detected (PLIP) GOL.5: 1 residues within 4Å: Chain A: Q.172 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 3 residues within 4Å: Chain A: Y.11, D.133, R.134 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seibold, S. et al., Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (P21 Form 1). To be published

Release Date

2023-04-12

Peptides

Dephospho-CoA kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dephospho-CoA kinase

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