- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 4 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)
- 12 x CLR: CHOLESTEROL(Non-covalent)
CLR.2: 8 residues within 4Å:- Chain A: L.878, V.898, I.902, F.905
- Chain D: E.1009, T.1010, M.1013
- Ligands: CLR.14
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: A:L.878, A:L.878, A:V.898, A:I.902, A:I.902, D:T.1010
CLR.3: 12 residues within 4Å:- Chain A: F.1003, R.1012, P.1015, F.1016
- Chain B: V.942, L.945, L.946, I.972, L.975, F.976, Y.979
- Ligands: CLR.4
10 PLIP interactions:6 interactions with chain A, 4 interactions with chain B- Hydrophobic interactions: A:F.1003, A:P.1015, A:F.1016, A:F.1016, B:L.945, B:L.946, B:F.976, B:Y.979
- Hydrogen bonds: A:R.1012, A:R.1012
CLR.4: 6 residues within 4Å:- Chain A: E.1009, R.1012, M.1013, F.1016
- Ligands: CLR.3, CLR.6
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:F.1016, A:F.1016, A:F.1016, A:F.1016
- Hydrogen bonds: A:E.1009
CLR.6: 8 residues within 4Å:- Chain A: E.1009, T.1010, M.1013
- Chain B: L.878, V.898, I.902, F.905
- Ligands: CLR.4
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:L.878, B:L.878, B:V.898, B:I.902, B:I.902, A:T.1010
CLR.7: 12 residues within 4Å:- Chain B: F.1003, R.1012, P.1015, F.1016
- Chain C: V.942, L.945, L.946, I.972, L.975, F.976, Y.979
- Ligands: CLR.8
10 PLIP interactions:4 interactions with chain C, 6 interactions with chain B- Hydrophobic interactions: C:L.945, C:L.946, C:F.976, C:Y.979, B:F.1003, B:P.1015, B:F.1016, B:F.1016
- Hydrogen bonds: B:R.1012, B:R.1012
CLR.8: 6 residues within 4Å:- Chain B: E.1009, R.1012, M.1013, F.1016
- Ligands: CLR.7, CLR.10
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:F.1016, B:F.1016, B:F.1016, B:F.1016
- Hydrogen bonds: B:E.1009
CLR.10: 8 residues within 4Å:- Chain B: E.1009, T.1010, M.1013
- Chain C: L.878, V.898, I.902, F.905
- Ligands: CLR.8
6 PLIP interactions:1 interactions with chain B, 5 interactions with chain C- Hydrophobic interactions: B:T.1010, C:L.878, C:L.878, C:V.898, C:I.902, C:I.902
CLR.11: 12 residues within 4Å:- Chain C: F.1003, R.1012, P.1015, F.1016
- Chain D: V.942, L.945, L.946, I.972, L.975, F.976, Y.979
- Ligands: CLR.12
10 PLIP interactions:6 interactions with chain C, 4 interactions with chain D- Hydrophobic interactions: C:F.1003, C:P.1015, C:F.1016, C:F.1016, D:L.945, D:L.946, D:F.976, D:Y.979
- Hydrogen bonds: C:R.1012, C:R.1012
CLR.12: 6 residues within 4Å:- Chain C: E.1009, R.1012, M.1013, F.1016
- Ligands: CLR.11, CLR.16
5 PLIP interactions:5 interactions with chain C- Hydrophobic interactions: C:F.1016, C:F.1016, C:F.1016, C:F.1016
- Hydrogen bonds: C:E.1009
CLR.13: 12 residues within 4Å:- Chain A: V.942, L.945, L.946, I.972, L.975, F.976, Y.979
- Chain D: F.1003, R.1012, P.1015, F.1016
- Ligands: CLR.14
10 PLIP interactions:4 interactions with chain A, 6 interactions with chain D- Hydrophobic interactions: A:L.945, A:L.946, A:F.976, A:Y.979, D:F.1003, D:P.1015, D:F.1016, D:F.1016
- Hydrogen bonds: D:R.1012, D:R.1012
CLR.14: 6 residues within 4Å:- Chain D: E.1009, R.1012, M.1013, F.1016
- Ligands: CLR.2, CLR.13
5 PLIP interactions:5 interactions with chain D- Hydrophobic interactions: D:F.1016, D:F.1016, D:F.1016, D:F.1016
- Hydrogen bonds: D:E.1009
CLR.16: 8 residues within 4Å:- Chain C: E.1009, T.1010, M.1013
- Chain D: L.878, V.898, I.902, F.905
- Ligands: CLR.12
6 PLIP interactions:5 interactions with chain D, 1 interactions with chain C- Hydrophobic interactions: D:L.878, D:L.878, D:V.898, D:I.902, D:I.902, C:T.1010
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, Y. et al., Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution. Nat.Struct.Mol.Biol. (2024)
- Release Date
- 2024-05-08
- Peptides
- TRPM2 chanzyme: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-tetramer
- Ligands
- 4 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)
- 12 x CLR: CHOLESTEROL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Huang, Y. et al., Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution. Nat.Struct.Mol.Biol. (2024)
- Release Date
- 2024-05-08
- Peptides
- TRPM2 chanzyme: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D - Membrane
-
We predict this structure to be a membrane protein.