SMTL ID : 8szv.1

Crystal structure of pregnane X receptor ligand binding domain complexed with T0901317 analog SJPYT-318

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x X1D: N-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]-N-[(4-phenoxyphenyl)methyl]benzenesulfonamide(Non-covalent)

X1D.1: 16 residues within 4Å: Chain A: L.91, L.122, M.125, S.129, F.163, C.166, Q.167, F.170, W.181, M.205, L.206, H.209, H.289, L.293, F.302, F.311 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.91, A:Q.167, A:F.170, A:L.206, A:F.311 Hydrogen bonds: A:Q.167 pi-Stacking: A:W.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huber, A.D. et al., Ligand flexibility and binding pocket malleability cooperate to allow selective PXR activation by analogs of a promiscuous nuclear receptor ligand. Structure (2023)

Release Date

2023-10-11

Peptides

Nuclear receptor subfamily 1 group I member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor subfamily 1 group I member 2

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